Gene P9211_12121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_12121 
Symbol 
ID5731567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp1088520 
End bp1089701 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content38% 
IMG OID641285580 
ProductGTP-binding protein 
Protein accessionYP_001551097 
Protein GI159903753 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.467658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTAA TCATATTTTG TTGGTTAAGC CTCCCAAGAG GGTTTATTTT AATCAAATTA 
GTGTTTGCAT ATCGCTCAAG AGCTTTTCTT ATGCTGAAAG TTGGAATCAT TGGCCTGCCA
AACGTTGGGA AATCAACTTT ATTTAATGCC TTGGTAGCGA ATGCTCAGGC TCAAGCAGCT
AACTTCCCAT TCTGTACTAT TGAACCAAAT ATTGGGACAG TTGCAGTTCC TGATGAAAGG
CTTAACTTAC TTGCAGCGCT TAGTTCTAGT AAGGAGATAA TCTCTGCAAG AATTGAGTTT
GTTGATATTG CAGGACTTGT TGAAGGTGCT AGTCAGGGAG AAGGTTTAGG GAACAAATTC
CTTGCAAACA TAAGAGAGGT AGATGCGATA GTTCATGTGG TTCGGTGCTT TGAAGATGAG
AATGTTATCC ATGTCTCTGG TTCAGTAGAC CCTATTAGAG ACATTGAAAT AATCAATTTA
GAGCTTGGCT TGTCTGATCT TGCTCAAATA GAGAAACGAA AAGAGAGACT ACAGAAACAG
ATCAGAATTA ATAAGGACGC TCAACTTGAA TATGCAGCTT TAGAAAGAAT CAATCTGACA
CTTCAACAGG GTGGTGCAGC TAGAGAGGTA GATTTACAAG ATGAAGAAAG GATTTTGGTT
AAACCTTTAG GTCTACTTAC ATCCAAACCT ATTATTTACG CTAGTAATTT AACCGAAGAT
GATATAGCTA TAGGGAATGC TTACTCAACT AAAGTCAATG ATTTTGCGGT CTCTCAAGGC
TCTCAGAATG TGAAAATTTC AGCACAAGTT GAATCAGAAC TAATTGATTT AGGAGAACAA
GAGAGATTAG ATTACTTAAA TGATCTAGGC GTTAAAGAAG GTGGACTACA AAGCCTTATA
AGAACTTCTT ATGATCTTTT GGGATTGCAA ACATACTTCA CCACTGGAGA AAAGGAAAGC
AGAGCTTGGA CTATTAAGCA AGGAATGACA GCACCTCAGG CTGCAGGAGT AATACATACT
GACTTTGAAA GAGGATTTAT TAGGGCGCAA ACTATTGGAT ATAGAAAGCT GTTGGAAGCA
GGTTCTTTCG TTGAAGCAAA GAGCAAAGGC TGGTTAAGAA GTGAAGGTAA GGACTATGTC
GTAGAAGAGG GTGACGTAAT GGAATTCTTG TTTAATGTAT AG
 
Protein sequence
MALIIFCWLS LPRGFILIKL VFAYRSRAFL MLKVGIIGLP NVGKSTLFNA LVANAQAQAA 
NFPFCTIEPN IGTVAVPDER LNLLAALSSS KEIISARIEF VDIAGLVEGA SQGEGLGNKF
LANIREVDAI VHVVRCFEDE NVIHVSGSVD PIRDIEIINL ELGLSDLAQI EKRKERLQKQ
IRINKDAQLE YAALERINLT LQQGGAAREV DLQDEERILV KPLGLLTSKP IIYASNLTED
DIAIGNAYST KVNDFAVSQG SQNVKISAQV ESELIDLGEQ ERLDYLNDLG VKEGGLQSLI
RTSYDLLGLQ TYFTTGEKES RAWTIKQGMT APQAAGVIHT DFERGFIRAQ TIGYRKLLEA
GSFVEAKSKG WLRSEGKDYV VEEGDVMEFL FNV