| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_11241 |
|---|
| Symbol | leuA |
|---|
| ID | 5730286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 1027908 |
|---|
| End bp | 1029518 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641285492 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_001551009 |
|---|
| Protein GI | 159903665 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.364831 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGG ATCCAGGCCG AGTTTTAATT TTTGATACCA CCTTAAGAGA TGGTGAGCAA
TCTCCTGGTG CGAGTTTGAA TTTAGAAGAG AAACTTGCCA TTGCGCAGCA ACTTGCAAGG
TTAGGAGTTG ACATAATTGA AGCAGGGTTC CCATACGCAA GCCAAGGAGA CTTTACTGCT
GTTCAAAGGA TAGCTGAGCA AGTCGGTGGA GAAGAAGGGC CTATTATCTG CGGTCTTGCC
CGAGCTTCAA AAGCAGATAT CAAAGCTTGT GGAGAAGCAA TTGCGCCTGC TCCTAAAAAG
AGAATTCATA CATTTATTGC AACTAGTGAT ATACATCTTG AGCATAAACT TCGAAAAACA
AGAGAGGAAG TGATTCAGAT TGTCCCTGAG ATGGTTCATT ATGCGAAGTC TTTCTCAGAA
GATGTTGAAT TCTCTTGTGA AGATGCCGCT AGAAGTGATC CAGATTTTTT ATATGAACTA
ATTGAGCTTG CTATTTCTGC AGGTGCCGGC ACTATTAACA TTCCCGACAC AGTGGGTTAT
ATAACACCAT CAGAATTTGG AGAATTAATT CAAGGAATAG ATGCCAATGT GCCAAATATT
GATGAGGCGA TTTTATCCGT GCACGGTCAT AATGATCTGG GTCTTGCAGT GGCTAATTTC
TTGGAAGCAA TTAAGAGAGG TGCGAGACAG TTGGAATGCA CAATTAATGG CATAGGAGAA
AGAGCAGGGA ATGCAGCTTT AGAAGAATTG GTTATGGCTT TACATGTGCG TAGGAGTTTT
TATAACCCCT TTTTCGGTAG AGATCCTGAA AGCCCTACAC CACTTACAGC AATTCGTACT
GAAGAAATAA CAAAGACTTC ACGTCTGGTC TCAAATTTAA CTGGGATGGT GGTTCAACCA
AACAAGGCAA TTGTTGGCGC TAATGCCTTT GCTCATGAAT CAGGCATTCA TCAAGATGGA
GTTTTAAAAA ATCGGCTAAC TTATGAAATA GTTGACGCAA AAACAGTCGG TCTTACAGAT
AATAGGATCT CATTAGGGAA GCTAAGTGGA AGAAGTGCTG TAAGGGCAAG ACTTGAAGAA
TTAGGATATG ATCTTACGAG AGATGATTTA AATGAGGCAT TCGCCAAATT TAAGGATTTG
GCAGATCGTA AAAGAGAAAT TACTGATAGA GATTTAGAAG CGATAGTTAG CGAACAGGTG
ATGCAACCCG ATGCAAGATT TCAACTACAA CTTGTTCAAG TAAGTTGTGG AACGACATTA
AAGCCTACAG CCACAGTCAC TCTTGCAGAT CAAGATGGTA CTGAGCAAAC GGCAGTCGCC
CTTGGAACTG GGCCTGTTGA TGCTGTTTGC AAGGCACTTG ACTCTTTAGC AGGAGAAAGT
AATGAATTGA TTGAATTTTC AGTTAAGTCT GTAACGGAAG GAATTGATGC CTTGGGCGAA
GTTACAATTC GTCTAAGGAG AGAAGGCAAA ATTTTTTCTG GTCATTCTGC TGATACAGAT
GTTGTTGTTG CCGCAGCTCA GGCATACGTA AATGCTCTTA ATAGGCTTAT ATATTTTGAA
AAAAAGAACC CTATTCACCC TCAGCATGAT CTGATCAAGG CAAACCTATG A
|
|---|
| Protein sequence | MAKDPGRVLI FDTTLRDGEQ SPGASLNLEE KLAIAQQLAR LGVDIIEAGF PYASQGDFTA
VQRIAEQVGG EEGPIICGLA RASKADIKAC GEAIAPAPKK RIHTFIATSD IHLEHKLRKT
REEVIQIVPE MVHYAKSFSE DVEFSCEDAA RSDPDFLYEL IELAISAGAG TINIPDTVGY
ITPSEFGELI QGIDANVPNI DEAILSVHGH NDLGLAVANF LEAIKRGARQ LECTINGIGE
RAGNAALEEL VMALHVRRSF YNPFFGRDPE SPTPLTAIRT EEITKTSRLV SNLTGMVVQP
NKAIVGANAF AHESGIHQDG VLKNRLTYEI VDAKTVGLTD NRISLGKLSG RSAVRARLEE
LGYDLTRDDL NEAFAKFKDL ADRKREITDR DLEAIVSEQV MQPDARFQLQ LVQVSCGTTL
KPTATVTLAD QDGTEQTAVA LGTGPVDAVC KALDSLAGES NELIEFSVKS VTEGIDALGE
VTIRLRREGK IFSGHSADTD VVVAAAQAYV NALNRLIYFE KKNPIHPQHD LIKANL
|
|---|
| |