Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_10961 |
Symbol | lysA |
ID | 5731074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | - |
Start bp | 996900 |
End bp | 998267 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641285463 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001550981 |
Protein GI | 159903637 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.297348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.231621 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTGTTT CAAGGCTCTT CGACTTAAAT AAGGATCAAA ACAGTCCCAA TAGAAACATA ACTCCAATTA CTGCTGAACT GGACAATTCA GATAGAATGA CAGTTGGCGG ATGTTTGCTT AGTGATCTTG CCAATCAATA TGGGACACCT CTTTATGTAA TTGATGAGGC CAGTATTAGA AGCTCTTGCA GGGCATATAG GAAGGCTCTC AAACAAAGCT ACCCTGGGGA TTCTTTTGTT TTATACGCCT CTAAAGCAAA TAGTTCTTTG GCTATTGATA GGATTGTTGC TTCAGAAGGA CTGGGTATAG ACGTAGTTTC CGAGGGTGAG TTAATTACAG CCTTAAAAAG TGGTGTCGCA GGGGAACAAA TTGTTTTACA TGGAAATAAC AAGTCTGACA AGGAGTTGTT ACTAGCGCAT GAGAGTAACG CAACTATTAT CATTGATAAT CAACATGATA TACAGCGCTT GGATAAACTA ATTAGCCATA AAGAAGGTAG TGTTAGATTA ATGTTACGCT TTACCCCAGG AATAGAATGC CATACGCATG AATATATTCG TACAGGTCAT TTAGATAGTA AGTTTGGGTT TGACCCTGAG CAAGTTTCAG ATACATTTGC ACAATTAAAG GATTATAAAT GGGCAAAATT AGTTGGTCTT CATGCACATA TAGGCTCTCA AATTTTCGAA TTATCACCTC ATATGGATTT GGTAGAAGTT ATGGCAGATT TCTTTTTAAG AGCAAAAGAT CTAGGTCATC CTATAAAAGA CTTAAATATT GGCGGAGGAC TTGGTGTTAA ATATATTCCT TCTGATGATC CCCCAGATAT TTATAGTTGG GTAGAAACTG TATCAAATGC TGTTATTAAA GCATTTGATA CAAGAAATAT TGAATTGCCA AGACTGATTT GTGAGCCTGG GAGGTCAATT ATTGCTACTG CAGGGCTAAC TCTCTATAGA ATTGGAGCTC GTAAAGATAT TCCAGGAGGA AAGACCTATC TGTCAATAGA TGGAGGAATG AGTGATAACC CTCGCCCAAT AACTTACCAA TCCACTTATA CAGCTTGTTT AGTTGACAGA CCATTGGCTA ATACTGATCA GGTCGTCACA ATTGCTGGAA AACATTGTGA ATCAGGAGAT ATTCTTTTAA ATAATATTGC TTTACCCACC GCTTCTAGTG GTGATGTCCT GGGTGTTTTT GGCACAGGAG CTTATAACCT TTCTATGAGC TCTAATTACA ATAGAATTCC AAGACCGGCT TCAGTTTTGG TTAATAATGC ACAGTCAGAT CTTGTTCAAG TAAGAGAGTT GCCTGAAGAT CTATTGCGAT ATGACCGCCT TCCAGATCGC TTTATTGCCA AAGGGTAG
|
Protein sequence | MGVSRLFDLN KDQNSPNRNI TPITAELDNS DRMTVGGCLL SDLANQYGTP LYVIDEASIR SSCRAYRKAL KQSYPGDSFV LYASKANSSL AIDRIVASEG LGIDVVSEGE LITALKSGVA GEQIVLHGNN KSDKELLLAH ESNATIIIDN QHDIQRLDKL ISHKEGSVRL MLRFTPGIEC HTHEYIRTGH LDSKFGFDPE QVSDTFAQLK DYKWAKLVGL HAHIGSQIFE LSPHMDLVEV MADFFLRAKD LGHPIKDLNI GGGLGVKYIP SDDPPDIYSW VETVSNAVIK AFDTRNIELP RLICEPGRSI IATAGLTLYR IGARKDIPGG KTYLSIDGGM SDNPRPITYQ STYTACLVDR PLANTDQVVT IAGKHCESGD ILLNNIALPT ASSGDVLGVF GTGAYNLSMS SNYNRIPRPA SVLVNNAQSD LVQVRELPED LLRYDRLPDR FIAKG
|
| |