| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10881 |
|---|
| Symbol | psbP |
|---|
| ID | 5731127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 990470 |
|---|
| End bp | 991030 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641285455 |
|---|
| Product | photosystem II oxygen evolving complex protein PsbP |
|---|
| Protein accession | YP_001550973 |
|---|
| Protein GI | 159903629 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.327352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATT TTTTAAAAGC TTTTCGAAAC TTTTTTCTTG CATTCCTATT GATTTGCTCT
GTAACTGCAT GTAATACCTC ATCAACAGCT GGATTAGAAG CTTTTCAAAG TAACGATGGT
CGATACGGAT TCTTTTATCC AACTGGATGG ACGCGAGTAA CAGTTAGTGG TGGCCCAGAA
GTTGTTTTCC ATGATGTTAT TAATAGTGAT GAAACTCTTA GTCTTGTAGT TTCAGACCTA
GACGAAGATG TTGACCTCGA GGAACTAGGT GGACCAAAAA CTGTTGGGCA GAGACTAATT
GAGCAGGTTT TTTCAGCTGA CGGTGCTGGT AGACAGGCAG AATTATTAGA TGCCCAAAAA
AGAGAATTTG ATGGTCATAC CTTTTATGAT ATTGAGTACT CTATACATCT TCCTAATAGA
GATAGACATG AGTTGGCTAC AGTAGTTATT GACCGAGGAT CCCTATTCAC TTTGGCAGCT
AGTACTAATG AGAATAGATG GCCTAGAGTC AAAGAACTAT TTGGTCGTGT TATTACTTCC
TTTAATTTCC TCTATGGATA A
|
|---|
| Protein sequence | MSNFLKAFRN FFLAFLLICS VTACNTSSTA GLEAFQSNDG RYGFFYPTGW TRVTVSGGPE
VVFHDVINSD ETLSLVVSDL DEDVDLEELG GPKTVGQRLI EQVFSADGAG RQAELLDAQK
REFDGHTFYD IEYSIHLPNR DRHELATVVI DRGSLFTLAA STNENRWPRV KELFGRVITS
FNFLYG
|
|---|
| |