| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10571 |
|---|
| Symbol | prlC |
|---|
| ID | 5730559 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 953082 |
|---|
| End bp | 955199 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641285424 |
|---|
| Product | M3 family peptidase |
|---|
| Protein accession | YP_001550942 |
|---|
| Protein GI | 159903598 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCATT CAAAGAAAAC TCCAGCAATC TTGGTCGGCA AAGGATTACC TAATTACAAA
GAGATAACGC CAAAACAAAT ACTTAAATAT ATTCCTTCTC TACTAAAAGA GCTCTCTAGA
AGATTTGAAT CCTTAGAAAG AACAATTGAG ACATCAATTG AACAAGAAGA TATTTTGAGT
TGGGATAGTC TGATGAGGCC ACTACAAGAA ATATCTGAAC AGCTTAGATG GAGTTGGGGG
GTAGTAGCTC ATTTGAATGC TGTGTGTAAT TCTGAGGAAC ACCGAGATGT ATACGCTTCA
CTTCAACCAG ATATTGTTCG GTTCTCTAAT CGTATAGGCC AAAGCAAAAA CTTATTCAAA
GCAATTTCAA TACTTGAATC TAATGAAGGT GACATATTAG ATGAAACTCA GCAGAGAATT
ATCCATACAG AGATACTCAG CATGAAGCAA AGAGGTGTTG GGCTGGAGAA ACAGCAAAGG
GAACAATTTA ATATAAACAG TGAACGGTTA GCAGAGTTAT CTACAAAATT TGGGAACAAT
GTTCTAGACG CTACCAAAAA ATGGGCATTA TTAATTACTG ATAAATCAGA AGTAAAGGGA
GTACCTCATC GAATCCTAGA GGCTTTAGCA AAGGCAGCAA AAGATTCAAA GGATATGCCC
GACGACCCTC TGAATGAACC TACAGCTGAG GAAGGACCTT GGCTAATTGG ATTAGACATG
CCAACCTATA TATCTATTAT TACTTATGCA GAGAGCAGGT CACTTCGTGA GAGGGTTTAC
AAGGCTTATG TAAGTAGAGC AAGCAGTGGA GAAAGCAATA ATAAAGGAAT CATTGAAGAG
ATTCTCATAA TAAGAAACAA TCAAGCAAGG CTTTTAGGCT ACAAAAACTG GGCCGAGATA
AGCCTCGACA ATAAAATGGC AAATAATGTA GAAGAAATAC AGGCACTTCT TGAAGAGTTG
CGAGCAGCCT CAATAGTTGC AGCCAAGAAA GAAATCAAAC AAATTCAAGA CATTGCTTTA
AGAAGTAATG CTGAGGAGGG CAATAGCCTT GCTGCATGGG ATATCAGCTA TTGGTCAGAG
AAACTAAAGC AAGAGCAATT CAACCTAAAC CAAGAATTCA TCAGGCCATG GTTTCCCCTT
CCACAAGTTC TCAATGGACT TTTTAAACTT TGTGGAAGAC TTTTTGATAT TTCAATTAAA
CCCGCCAGTG AAAATTTTCC AAGATGGCAT GAAGATGTAA GTTTATTTGA TGTCTTAGAT
TCAAATGGTG CAAAGATTGC ATCCTTCTAT TTAGATCCAT ACTCAAGGCC TGAAAGTAAG
AGAGGTGGTG CGTGGATGGA TGAATGCTTA ACAAGAGATA TATCCGATAA GAAAAATATT
ATCTTGCCAG TAGCCTATTT AATTTGTAAT CAAACACCAC CTGTAGGCGA CACCCCAAGC
CTTATGAGTT TTGAAGAGGT AAAGACTCTT TTCCATGAAT TTGGCCATGG ACTTCAACAT
ATGCTTACAA CAGTTGACTA TCCTCAGGCT GCAGGCATTA ATAACGTCGA ATGGGATGCG
GTTGAATTGC CTAGTCAATT CATGGAGAAT TGGTGTTTAG ATCCAACAAC GATTAAAGAA
ATTGCAAAAC ACTGGGAAAC AGGAGCTCCA CTTCCTGAAG AAGAGTTTGA AAAGTTGAAG
CTTAATCAGA AATTCAATTC AGGTCTTTCT ACACTTAGAC AAATTCACTT TTCAATTACG
GATATTAAAT TGCATAGCCA ATGGCACAAA GAGATTGGCG TAACACCAGA TGAAATGAGA
AGGGAAATAG CGAAAACAAC AACAGTCTTG CCACCAATTT CAGAAGATCA ATTCTTATGT
GCCTTTAATC ATATCTTTGC GGGTGGATAT GCTGCTGGGT ATTATTCATA TAAATGGGCA
GAAGTTCTTA GTGCAGATGC CTTTTCGGCC TTTGAGGAAG TTGGTTTAGA TAAACTAGAT
GAAATAAAAA GAATAGGCAA ACGATTCCGC GAGACGGTAC TAAGTCAAGG GGGGAGTAGG
CATCCATCAG AAATTTACAA GCTATTCCGT GGTAGACCAG CGACTACAAA GGCACTTATT
AGACATTCAG GCCTTTAA
|
|---|
| Protein sequence | MSHSKKTPAI LVGKGLPNYK EITPKQILKY IPSLLKELSR RFESLERTIE TSIEQEDILS
WDSLMRPLQE ISEQLRWSWG VVAHLNAVCN SEEHRDVYAS LQPDIVRFSN RIGQSKNLFK
AISILESNEG DILDETQQRI IHTEILSMKQ RGVGLEKQQR EQFNINSERL AELSTKFGNN
VLDATKKWAL LITDKSEVKG VPHRILEALA KAAKDSKDMP DDPLNEPTAE EGPWLIGLDM
PTYISIITYA ESRSLRERVY KAYVSRASSG ESNNKGIIEE ILIIRNNQAR LLGYKNWAEI
SLDNKMANNV EEIQALLEEL RAASIVAAKK EIKQIQDIAL RSNAEEGNSL AAWDISYWSE
KLKQEQFNLN QEFIRPWFPL PQVLNGLFKL CGRLFDISIK PASENFPRWH EDVSLFDVLD
SNGAKIASFY LDPYSRPESK RGGAWMDECL TRDISDKKNI ILPVAYLICN QTPPVGDTPS
LMSFEEVKTL FHEFGHGLQH MLTTVDYPQA AGINNVEWDA VELPSQFMEN WCLDPTTIKE
IAKHWETGAP LPEEEFEKLK LNQKFNSGLS TLRQIHFSIT DIKLHSQWHK EIGVTPDEMR
REIAKTTTVL PPISEDQFLC AFNHIFAGGY AAGYYSYKWA EVLSADAFSA FEEVGLDKLD
EIKRIGKRFR ETVLSQGGSR HPSEIYKLFR GRPATTKALI RHSGL
|
|---|
| |