| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10431 |
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| Symbol | menD |
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| ID | 5730761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 937510 |
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| End bp | 939354 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641285410 |
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| Product | menaquinone biosynthesis protein/2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase |
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| Protein accession | YP_001550928 |
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| Protein GI | 159903584 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.512324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.917338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTCATA TTTGGAGTTT TTATCCGAGG ATTGGATCAG CTACTCCATT TTCACTGTCT
TTAGCACGCA CCAACCTTTT CATAGCAATA AAGCTACTAA ACGCTTTCCA AAGTTATGGG
ATGGAAAATC TAGTTCTTTG TTCTGGAAGT AGATCTGGAC CATTGGCAAT AGCTGCTGGA
GGCTTGGCCG AGTCATTTGA CCTGAAGCTT TATACAGCTG TTGATGAAAG ATCTGCAAGT
TTTATGGCTC TTGGCCTTAG TGCTGCAACT GGCAAGGGGG TAATTGTGAT AACAACTTCA
GGAAGTGCAG TTGGAAACCT TTTGCCTGCA GCTATCGAAG CAGATAGGTC CTGTCATCCG
ATTATTTTTA TTACTGCAGA TAGGCCTGAG CGATTAAAGA ATTGCGGCGC CAATCAAAGT
GTAAATCAAG AAGAGTTTCT TTTGGCTGTT TCTAGATCTG TTAAATCAGG CCCAACTCTT
GGTATACATA AATTTACTTC TCAAACACTT AATGAACTTA CTTCTAATGT TTGGGCCTTA
GCTCATGATT TCCCTGGACC AGTTCACTTA AATCTTCCAA TAGAAGAACC ATTACTGGCT
TCATTTGAAG ACCAGAAGTC AGTATGGGAT GGTTGGGTGC CTGATTCATT TAATTACACT
CAATGTTCTA TAACTGCCAG CAAATTAAAA GAACCACAAA TTAATTCCAA CTTTCCTCAG
CTAGACCCTT ATAAACCTGG AATCTTAATA ATTGGTCCTT GGAGAGGAGC TCTTAAAGAC
TTAAATGATT TCCAAGAAAC CGTTAAACTC TGGTCAGAAT TAACTGGGTG GCCAGTATTT
GCTGACCCAC TTTCACTAGC AGCACTCAAC TCTGATAGCT GTATTAAATA TTGGGAGCAT
ATTCTCTCTT CTGGGATCTC AATTCAAGAG AAAAATTTAC AGATTCTTCG TTTAGGTCCT
ATGCCTTCAA GTCGAATACT TGAGAATTGG TTAAAGAATA TTTCTTCATT GCAGGTTCTT
ATAACAGAAG GGGATACAAG ACCTCTTGAT CCTCTTAAGA TTGCTTTTCA ATATTCGAGA
GGTTTTGTTA GCTGGTATAA GGAATTACTA AGGATTAATA AATTTAAAAC GAAGATGCAG
AGCAAACTTC TTACATCTTC GTTAAAAGCA ATCAATAAGG ATGATCAGAT TATAGCGAAT
TGGTTAGGTG AAGAGTTCTT ATTAGATGAT GACATTACTG AACCATCATT GGCATATTGG
TTGCCAAAAT TATTACCTGA GGAAATTCCA ATAATGCTTT CTGCTAGTAG TCCAATTAGA
GATTGGATAA CCTTCTCTGG TTGTGGTGGC TATGGTCCTA GATTTTTCTA TGGTTTTAGA
GGGGCTTCAG GAATTGATGG TACTTTATCT TTAGCTATGG GGCTTTCATT CGCTAAAGGT
AGAATGATAT TAATTACAGG AGATCTTGCA TTGCTCCATG ATATTAATGG TTGGTTATTC
TCGCAAATCA AACCTTTGTC GTTAATTATA ATATTGATTG ATAACTGTGG TGGCGGCATA
TTTAAACAAA TTCATAATAA TCAAATTTAT AAAGGTGATT TTAATGAGTT ATTTATTATG
CCTCAGCATG TAAATCATCT TGAACTTGCT TCAGCCTATA AAATTACATC AAGGCAGGTC
AAGAATTTTA ACGAATTAAA ATTGGCTTTG GATTGGAGTT TAAATCTATC TGAGCCGGTC
TTACTCAGAG TCACTACAAA CTCATCAAGT GATAGCTCTT TAAGGAAAGA TATATCCTAT
AGGCTGAAGG AATATGTAAA TGAGTCTAAG AAAAACTCTA CCTAA
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| Protein sequence | MFHIWSFYPR IGSATPFSLS LARTNLFIAI KLLNAFQSYG MENLVLCSGS RSGPLAIAAG
GLAESFDLKL YTAVDERSAS FMALGLSAAT GKGVIVITTS GSAVGNLLPA AIEADRSCHP
IIFITADRPE RLKNCGANQS VNQEEFLLAV SRSVKSGPTL GIHKFTSQTL NELTSNVWAL
AHDFPGPVHL NLPIEEPLLA SFEDQKSVWD GWVPDSFNYT QCSITASKLK EPQINSNFPQ
LDPYKPGILI IGPWRGALKD LNDFQETVKL WSELTGWPVF ADPLSLAALN SDSCIKYWEH
ILSSGISIQE KNLQILRLGP MPSSRILENW LKNISSLQVL ITEGDTRPLD PLKIAFQYSR
GFVSWYKELL RINKFKTKMQ SKLLTSSLKA INKDDQIIAN WLGEEFLLDD DITEPSLAYW
LPKLLPEEIP IMLSASSPIR DWITFSGCGG YGPRFFYGFR GASGIDGTLS LAMGLSFAKG
RMILITGDLA LLHDINGWLF SQIKPLSLII ILIDNCGGGI FKQIHNNQIY KGDFNELFIM
PQHVNHLELA SAYKITSRQV KNFNELKLAL DWSLNLSEPV LLRVTTNSSS DSSLRKDISY
RLKEYVNESK KNST
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