| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10411 |
|---|
| Symbol | glgA |
|---|
| ID | 5731054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 935086 |
|---|
| End bp | 936558 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641285408 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_001550926 |
|---|
| Protein GI | 159903582 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.951969 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTTC TTTTCGCTGC TGCCGAATGC GCCCCGATGG TTAAGGTCGG CGGCATGGGA
GATGTTGTCT CTTCTTTGCC ACCAGCACTG GCAAAACTTG GCCATGATGT TCGATTGATT
ATCCCAGGCT ATGGGAAGCT ATGGAGCTTA TTAGATATAC CAAGCGAACC AATATTTCGA
GCGCAAGCAA TGGGCTCAGA TTTTGCAGTT TATGAAACTA GACATCCTAT TTCTTCACTC
CCTTTATATC TTGTAGGTCA TCCTGCTTTT GACCCAGAGA GAATTTATGG TGGAGATGAC
GAAGATTGGA GATTTACTTT CTTTGCAAGT GCCACTGCAG AATTTGCCTG GAATTCATGG
AAACCTCAAG TTCTTCATTG TCATGATTGG CATACAGGCA TGATCCCTGT GTGGATGCAT
CAAGACCCCG AGATAAGCAC TGTATTTACG ATACATAACC TTAAATATCA AGGTCCCTGG
CGCTGGAAGT TGGAGAGAAT GACTTGGTGC CCTTGGTATA TGCAAGGAGA CCACACAATG
GCTGTCGCCA TGCTTTATGC AGATAGAGTT AATGCAGTTT CTCCTACCTA CGCAAAAGAA
ATTTGTACTT CAGAATATGG AGAGAAATTA GACGGTTTAC TTAATTATAT TTCTGGCAAA
TTAAGAGGCA TTCTTAATGG AATTGATCTA GATGATTGGA ACCCTGAAAC TGATAAAGCT
TTACCGGCTA ATTTCAGCGC TTCGAATATT TTAGGTCGAA GGAAAAATAA AGCTGCCCTT
CAATCCCAAA TGGGACTTGA TGTTAAACCG AATAGTTACT TGCTTGGTAT GGTTGGCAGG
CTTGTTGACC AGAAAGGTGT TGACTTACTT CTTCAGGTTG CCAGGAGATT ACTTGCTTAC
ACCGACTCAC AGATAGTTGT TCTGGGGACT GGAGAATCCG CTTTGGAATC AGCCCTTTGG
CAGCTTGCTA CTGAATATCC AGGCCGATTC GCAGTTTTCT TAACATACGA TGACTATCTG
TCACGCCTGA TTTATGCAGG GACAGATGCT TTCCTTATGC CCAGTAGGTT TGAGCCTTGT
GGCATAAGTC AACTGTTGGC AATGCGGTAT GGGTCGATTC CTGTAGTGAG AAATGTAGGT
GGGTTAGTAG ACACAGTTTC ACCTCATGAC CCTAGTAAAC AGACTGGAAC AGGGTTTTGC
TTTGATCGGT TTGAGCCAAT AGATTTTTAT ACTGCCTTAG TTAGATCTTG GGAGGCATAT
CGGCATCGTA GAAGTTGGCG TAGATTACAA ATTAGAGCTA TGACCCAAAC TTACAGCTGG
GACAGATCTG CTTATGAATA TGAAAACATG TACAAAGATG TATGTGGTGT CAAGGAACCT
TCCCCCGATG CAGAGGAGGT TGAGAAGTTT TCAGTAGGCC AAGATGCCGA TCCTTCTCTA
AAAAAAGCTG TAGTAAGTGA TAGTGAGAAA TAA
|
|---|
| Protein sequence | MRVLFAAAEC APMVKVGGMG DVVSSLPPAL AKLGHDVRLI IPGYGKLWSL LDIPSEPIFR
AQAMGSDFAV YETRHPISSL PLYLVGHPAF DPERIYGGDD EDWRFTFFAS ATAEFAWNSW
KPQVLHCHDW HTGMIPVWMH QDPEISTVFT IHNLKYQGPW RWKLERMTWC PWYMQGDHTM
AVAMLYADRV NAVSPTYAKE ICTSEYGEKL DGLLNYISGK LRGILNGIDL DDWNPETDKA
LPANFSASNI LGRRKNKAAL QSQMGLDVKP NSYLLGMVGR LVDQKGVDLL LQVARRLLAY
TDSQIVVLGT GESALESALW QLATEYPGRF AVFLTYDDYL SRLIYAGTDA FLMPSRFEPC
GISQLLAMRY GSIPVVRNVG GLVDTVSPHD PSKQTGTGFC FDRFEPIDFY TALVRSWEAY
RHRRSWRRLQ IRAMTQTYSW DRSAYEYENM YKDVCGVKEP SPDAEEVEKF SVGQDADPSL
KKAVVSDSEK
|
|---|
| |