| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10231 |
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| Symbol | gadB |
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| ID | 5729997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 915244 |
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| End bp | 916611 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641285390 |
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| Product | pyridoxal-dependent decarboxylase family protein |
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| Protein accession | YP_001550908 |
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| Protein GI | 159903564 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.1178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGCTTT TTCCATCTCC AGATCAATTT GATGATAATT TTCAGGCATT CCTTGAGGAG
GCTTGTTTAA AACTTTGCGA TTGGTTTTCC AAGGCAGAAG AAACTGGTCC TTTGCCTTCA
ATCAATGATT TGCCCGAAGT AGGTCCTAAA TTCGCTGGTT TATCCAGGAA GGATTTGTTG
AAAGACCTGG ATTTAATCAT GAATGGCTCT TTTCAGCCTT CCCACCCAGG CTCATTAGCT
CATCTTGACC CGCCTCCTTT AAGTGCATCA ATTGTAGGAG ACTTAATTTG CGCCGGTCTA
AATAATAACC TTTTAGCAGA AGAGCTATCC CCCAGTCTTT CTAGATTAGA AAATAATTTG
TGTAGATGGA TTGCCCAAAA AATTGGTATG AAGACTGGTT CAGGAGGAGT GGCAGCAAGT
GGTGGAAGTT TAAGCAATCT TATGGCGCTT GTGTTGGCTC GCCATCATTC TGGCCTCTCA
ACAGATCCAA ATGCAGTAAT TCTTGTTAGC GAAGAAGCGC ATGTATCTAT TTACAGGGCA
ATTAAAATCA TGGGCCTGCC TGCTGAAGCG ATTTATAAAG TTTCTGCTGA TAATTCTGGG
CGACTTTCCA TTAATTCTTT GAACGAGCAG ATTGCAAAAT TAAAGTTTCT TGGCCATAAA
TGCTTTTGTG TTGTAGCTAC TGCCGGAACC ACCATACGTG GTGCCGTTGA TCCTATTGAT
GATATTTCAG ACTTTTGCTT TTCTGAAGGA TTGTGGCTTC ACGTTGATGC CTCAATTGGA
GGAGTCTTCT CTCTAGCTGA GGAAACAAAG TCTGTTGTTC CAGGTTTGTC ACGTGCAGAC
TCAATAACTA TGAATCCTCA GAAACTTCTT GGGATTACGA AAACATCCTC TTTGTTACTT
GTAGCCAATA CTAATCACCT TTCTTCCTGC TTCTCAATAG GGTTTCCTTA CATTGAACCA
TCTTGGGGAT CGACTATGAA TGGAGGAGAA ATGGGAATGC AAGGAACAAG ACCTGCTGAG
ATCCTGAAGT TATGGCTTGG TTTGCGTCAA CTAGGACACT CTGGTATTCA AGCACTCCTA
GTGAATTCCA TTGAAAGAAA AACGTATTTC AAAAACAGAA TCAACTCGGA TATCTTTGAG
ATTATTACTG GCCCATTGCA CTTAATTGCA TTAACACCTA GTGCAATCAC AAAAGAACAA
GCAGCTGAAT GGGCTTTGAG TACCAGGCAA TTATTGATGG ATAATAAATT TATGCTCTCA
CGACCACTAT TAAATGATCG ATATTATCTA AAAGCTGTTA TGGGCAACCC TCATACACAA
AATAGTCACT TAGACCAGTT GTCTAATCTT TTAAATCAGT CGATATAG
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| Protein sequence | MELFPSPDQF DDNFQAFLEE ACLKLCDWFS KAEETGPLPS INDLPEVGPK FAGLSRKDLL
KDLDLIMNGS FQPSHPGSLA HLDPPPLSAS IVGDLICAGL NNNLLAEELS PSLSRLENNL
CRWIAQKIGM KTGSGGVAAS GGSLSNLMAL VLARHHSGLS TDPNAVILVS EEAHVSIYRA
IKIMGLPAEA IYKVSADNSG RLSINSLNEQ IAKLKFLGHK CFCVVATAGT TIRGAVDPID
DISDFCFSEG LWLHVDASIG GVFSLAEETK SVVPGLSRAD SITMNPQKLL GITKTSSLLL
VANTNHLSSC FSIGFPYIEP SWGSTMNGGE MGMQGTRPAE ILKLWLGLRQ LGHSGIQALL
VNSIERKTYF KNRINSDIFE IITGPLHLIA LTPSAITKEQ AAEWALSTRQ LLMDNKFMLS
RPLLNDRYYL KAVMGNPHTQ NSHLDQLSNL LNQSI
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