| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_10051 |
|---|
| Symbol | sir |
|---|
| ID | 5730038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 896643 |
|---|
| End bp | 898439 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641285372 |
|---|
| Product | sulfite reductase subunit beta |
|---|
| Protein accession | YP_001550890 |
|---|
| Protein GI | 159903546 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | [TIGR02042] ferredoxin-sulfite reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.155233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.609504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTAAAG AAGCACTAAG TTTGCCTGAT ATCGACGATT CGCCTCTCTC TCCTTGTGTT
GCCAATGGTC AAGACAGAAC TAAATTTGAA CAATTCAAAG CAGATAGTGA TTACTTAAAA
GAGCCCCTTA GAACAGAATT ACAAAACAAT AGTGATCATT TCAGTAACGA TGCTGTACAA
CTTTTAAAGT TCCATGGAAG TTATCAGCAG GACAATAGAG ATACCAGGCA AAAAGGAGTT
GAGAAAGACT GGCAAATGAT GCTGAGGCTA AGGAGCCCAG GCGGGCATAT ACCTCCGGAA
TTATTTGTGG CATTAGACCA TCTTTCAGAT CAGCTAGGCA ATGGAACTCT ACGAGCAACA
ACACGACAAG CATTCCAAAT GCATGGGATT AAGAAAGAAA GCCTAAAAAC TGTGATCGAA
ACAATTATTA GATCAATGGG TTCAACACTT GCGGCTTGCG GTGATATAAA CAGAAATGTA
ATGGCCCCAG CAGCGCCCTT TACATATGGT GACTACCCAG TTGCGCGACG TTTAGCAAAT
CAAATTGCAG ATGTACTTAG CCCCTCATAC GCTGAGAAAA CTTATCTCGA GCTTTGGGTT
GACGGAGATA TAAGCTATAA AATAAGCCCT TCTAATGAAG TTAAAAAAGT AAGAAAGAAT
CAATATAAGG AAGGTGTCTA TAGTGGAGAC ATTAAAGAAC CACTATACGG ATCAACTTAT
TTACCTAGAA AATTTAAATG TGCAGTTACA GTTCCTGGTG ATAATTCGGT TGACTTACTA
ACTCAAGACA TTGGTTTGGT TGTTTTTACT AATGCGAAAA ATAAACTTAT AGGCTGCAAT
GTTTACGTTG GCGGAGGAAT GGGGCGTACA CATAATAACG AAGAGACTTT TGCAAGATCT
GCTGAACCAA TTGGTTTCGT ATCTGCAGAA TATGTGCTCG AGTTGGTTCA ATCTATTCTT
GCTCTCCAAA GAGACTATGG TGACAGGAAG GTAAGAAGAC ATGCGAGAAT GAAGTATCTA
ATTAATGACA AAGGCATTGA GTGGTTTATT GACAAACTAA AAAATAATTA CTTCAAGTAC
CCTATAAAAA GTTTAAGGAA AGAACCAACC TCTAAATTAC TTGATTATCT TGGTTGGCAT
AAACAATCTC ATGATCTATA TTTTGTAGGC ATACCTCTTT TATCAGGTAG ACTTAGTGGA
GAGTATAAAA AAGCCATTTG TAAACTTGTT AATAAATTTA AATTAGATAT TCAGCTAACA
CCTAATCAAG ATCTACTACT CTGCAATATT GGAAGTTATC AAAGGTCATC TATTAAAAAG
GAATTAAGCA ATATTGGTAT TATTAAACCT GATTCACCTG AACCTATTCA AAGGCATGCG
TTAGCCTGCC CTGCTCTACC ACTTTGTGGT TTAGCTGTTA CAGAAGCTGA GCGAATCCTG
CCAGAAATTT TAGATCGTAT AAACACCCAG CTTTCTGACC TGAGGATTCA AAAGACGTTG
CTATTTCGTA TGACAGGTTG TCCAAATGGA TGCGCCAGGC CATACATGGC GGAACTAGCT
TTGGTAGGTA GTGGCTTAGA TCAATATCAA CTATGGCTTG GTGGTAGTCC GAACTTGCAA
AGGCTTGCGA AGCCTTTTAT TCAAAGGATG CCTTTGACAT CACTAGAAGA AACACTTAAG
CCTCTCTTTA TTAGTTGGAA GAATTCTAAA AAAGAAATTA GTTTCGGTGA CCATATGAAT
GAACTAGGAG ATCAAAATAT AATGGAGTTA CTATCACTAA AAGACAAGGA GCCATAA
|
|---|
| Protein sequence | MTKEALSLPD IDDSPLSPCV ANGQDRTKFE QFKADSDYLK EPLRTELQNN SDHFSNDAVQ
LLKFHGSYQQ DNRDTRQKGV EKDWQMMLRL RSPGGHIPPE LFVALDHLSD QLGNGTLRAT
TRQAFQMHGI KKESLKTVIE TIIRSMGSTL AACGDINRNV MAPAAPFTYG DYPVARRLAN
QIADVLSPSY AEKTYLELWV DGDISYKISP SNEVKKVRKN QYKEGVYSGD IKEPLYGSTY
LPRKFKCAVT VPGDNSVDLL TQDIGLVVFT NAKNKLIGCN VYVGGGMGRT HNNEETFARS
AEPIGFVSAE YVLELVQSIL ALQRDYGDRK VRRHARMKYL INDKGIEWFI DKLKNNYFKY
PIKSLRKEPT SKLLDYLGWH KQSHDLYFVG IPLLSGRLSG EYKKAICKLV NKFKLDIQLT
PNQDLLLCNI GSYQRSSIKK ELSNIGIIKP DSPEPIQRHA LACPALPLCG LAVTEAERIL
PEILDRINTQ LSDLRIQKTL LFRMTGCPNG CARPYMAELA LVGSGLDQYQ LWLGGSPNLQ
RLAKPFIQRM PLTSLEETLK PLFISWKNSK KEISFGDHMN ELGDQNIMEL LSLKDKEP
|
|---|
| |