| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_09741 |
|---|
| Symbol | lpxD |
|---|
| ID | 5730385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 865923 |
|---|
| End bp | 866966 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641285341 |
|---|
| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| Protein accession | YP_001550859 |
|---|
| Protein GI | 159903515 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.885993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00212294 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTCA GCCAATTAAT TGACTTCCTG AAAATTGGAG AAGCACATAT TCAAGATTTT
AATTTTGGAG ATGACCCGGA AATAACTAAA GCATCTTCAA TAGATATTGC TAATCCAGAT
GAAATTAGCT TTTTAGAGAA TGATAGTTAT CTATTAAGTC ACATGAGTTC AACAAATGCT
TCTGCTTTAT TGCTTCCTAA CAATAATCAA TTGATAGATA TAGCTAATTC CAGGGGGATT
GCCTGGGCAT CATTCAGAGA TCCAAAATTA GCCTTTGCAG AAACATTAGA GTATCTTCAT
CCTCAATCAC AGCCTCTTAT AGGAATTCAT AAAACTGCAG TCATTGGAAA AAATGTGAAG
ATTGGGAAGG AAGTCTCAAT TGGAGCAAAT GTAACAGTTG GTGATTACTG TCAAATAGGA
GAAGGAACAG TTATTAGTCC TGGGGTTGTC ATTTACAACA ATGTACAGAT AGGAATCAGG
GGTGAATTAC ATGCAAACGC TGTAATCCAT GAAAATACAA ATATCGGCAA TAATTGTACT
GTTCAATCAA ATGCTGTTAT TGGATCAGAA GGCTTTGGGT TTATCCCAAG CAAAAATGGC
TGGAGAAAAA TGCCACAAAT AGGAATTGTT GTTATTGAAG ATAATGTGGA GGTTGGAGCA
GGATCCACAA TAGATAGACC ATCTGTTGGC GAAACAAGAA TTGGTTCAGG TACGAAAATT
GATAACCTTG TTCAAATTGG CCATGGTGTC GTAACAGGAA GAAATTGCGC TATGGCAGCT
CAAGTAGGAA TTGCAGGAGG AGCCTCATTA GGAGATGGAG TAATTCTTGC TGGACAGGTT
GGTGTAGGAA ATCGTGTATC CATTGGGGAC GGTGTTATAG CGAGTTCAAA ATGTGGTGTT
CATGCAGATG TATCTCCTGG TGAGGTCATA AGTGGCTTCC CAGCCATGCC AAATAAGCTA
TGGCTGAGAT GTTCAGCAAA TTTCAAAAAA CTCCCTGAAA TTGCTAAATC AATAAGGGAT
CTGACAAAAT CACATAGAGG TTAA
|
|---|
| Protein sequence | MQFSQLIDFL KIGEAHIQDF NFGDDPEITK ASSIDIANPD EISFLENDSY LLSHMSSTNA
SALLLPNNNQ LIDIANSRGI AWASFRDPKL AFAETLEYLH PQSQPLIGIH KTAVIGKNVK
IGKEVSIGAN VTVGDYCQIG EGTVISPGVV IYNNVQIGIR GELHANAVIH ENTNIGNNCT
VQSNAVIGSE GFGFIPSKNG WRKMPQIGIV VIEDNVEVGA GSTIDRPSVG ETRIGSGTKI
DNLVQIGHGV VTGRNCAMAA QVGIAGGASL GDGVILAGQV GVGNRVSIGD GVIASSKCGV
HADVSPGEVI SGFPAMPNKL WLRCSANFKK LPEIAKSIRD LTKSHRG
|
|---|
| |