Gene P9211_09571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_09571 
SymbolpotA 
ID5730422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp851414 
End bp852484 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content37% 
IMG OID641285324 
ProductABC transporter ATP-binding protein 
Protein accessionYP_001550842 
Protein GI159903498 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0852854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000225107 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACTGATA TTCACCTACA TATAAACAAT CTTAGCCACT ACTATGGCAG TTCAAGTCAG 
ACTATACCTA CCTTACGATC AATAAATTTA TCACTTATTA GAGGCGAATT ACTTGGTATT
TTAGGCCCAT CAGGTTGTGG CAAAACCACA CTCTTGCGAC TGATAGCTGG TTTAGAGTCT
CCATCACAAG GAAATATTTG TATTGAAAAT AGAATAGTTT CTTCTCCAGA GCATGTTCTG
CCAACTGAAC GTAGGGGCAT AGGAATGGTT TTTCAGGATT ACGCATTATT CCCACATCTA
AATGTATGGA GAAATGTCTG TTTTGGGCTA TCCACAAATA GCGACAAAGC TAAGGCTAAT
TGGTTACTAG AACTCGTTGG GTTGATTGAT TTGCGAGATA GTTACCCTCA TCAACTATCT
GGTGGACAAA AACAAAGGCT AGCCTTAGCA AGGGCACTTG CTCCAGGCAC TTCATTACTG
CTTTTAGATG AACCTTTTTG CAGCTTAGAT GTAGAGGTAA GACATAATCT TCGCAATGTA
CTAACTAGTG TACTTAGATC CTGTTCAGCT ACAGCAATAT TAGTTACTCA TGACCCACAT
GAAGCCTTAG GCATTTGTGA TCGAGTGGCG GTATTAAAGG ATGGCTCTTT ACACCAGTGC
TCCTCCCCTG TCGATATGTT ACAAAAGCCA CTTACATCCT TTGTAGGTAA ATTTGTCTTT
CAAAATAATA TAGTAAATAT ACACTCAAAT GGTAATAGTT TCAATACACC ATATGGTTCG
ATCATTGCTC AATCTCATCT TTTTAAATCA CAGCCAAATG TCCTCATGTT TGATGAAAAC
TCCTTATCTA TATCATTAAA TCCCTGCGGT AAATGTACGA TTATAAGCAA AGAGTTTCGA
GCTTCTCAAT GGATTTGTAG AATTCAGGAT TCTCAAAATA TACTTAGGGT TTCAGTAACA
TTGGATGCTA ATATTAAGAT AGGAGATAAA TGCGACCTCA AATTTATTAA TGGTAAATAT
GCTTTTCTTT ATCCAGGCTG TGTTTCTTGT ATTCTTAAAG CAAATAATTA G
 
Protein sequence
MTDIHLHINN LSHYYGSSSQ TIPTLRSINL SLIRGELLGI LGPSGCGKTT LLRLIAGLES 
PSQGNICIEN RIVSSPEHVL PTERRGIGMV FQDYALFPHL NVWRNVCFGL STNSDKAKAN
WLLELVGLID LRDSYPHQLS GGQKQRLALA RALAPGTSLL LLDEPFCSLD VEVRHNLRNV
LTSVLRSCSA TAILVTHDPH EALGICDRVA VLKDGSLHQC SSPVDMLQKP LTSFVGKFVF
QNNIVNIHSN GNSFNTPYGS IIAQSHLFKS QPNVLMFDEN SLSISLNPCG KCTIISKEFR
ASQWICRIQD SQNILRVSVT LDANIKIGDK CDLKFINGKY AFLYPGCVSC ILKANN