Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_09401 |
Symbol | |
ID | 5730408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 836208 |
End bp | 837950 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641285306 |
Product | ABC transporter |
Protein accession | YP_001550825 |
Protein GI | 159903481 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000107359 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGATCTCTA AATCTGCTAA TAGCTTCCTA AGGTTTCTCC CCAGTTTAAT TCCACATTCT AAGGAATTGA TTTGGGGCGG AATCTCAATG CTTATATATG TTATCTGCTG GCCTGTTCTT GCATGGCTTG CAGGGAAATT AATACCAGCG ATTGGAATTG GAGATTTGGA ATTAGTAATA CAGATAATTA TTCAAGCTTT AGTAGTCTTT TTAGTCCAAA AAATAGCTCA ATTTAGCCAG GATATACTTT TAGCTGGCCC ATCACTAAAA ATCAGTCAGG AGCTTCGTCA AGATCTATTT GCCAAGCTCC AAAGGATAGA AGTTCAATCC CTTGAAAAGT TATCTTCAGG TGATATTGCT TATAGGCTTA CAGAGGATGC AGATAGAGTT GGAGAAGTAA TTTATAAAAC AATTCAAGAC ACAACACCTT GTATATTTCA ACTTGTCGCA GTATTTGGAT ATATGCTTTA TTTAGATTAC AAATTAGCTT TAGCTACTTT AATTTTAGCT CCTGTCATAT CACTACTAGT AGGTAATTTT GGAGAGAGAG TACTTCTAGC CTCAGAAAAA AGCCAAAAAC AAGTAAGTAC TCTTGCTGGA TTATTGGGAG AAGGTATACA GAGTCTTCCT CTAATAAGAG CCTTTGGCGT AGAGGAATGG TTTCAATCTA AATTTAATGT ACAGGTTCAA CAACATAGAA GAGCAAGATA CAAATCACTT AAGTTATTAG CTCTACAACA TCCAGTAGTT GGCTTTATTG AGGCACTTGG CATCTTATTG ATATTAGCTA TTGGAGCCTT CAGAATTCAG AATGGAGGTA TTGATTCAGA AGGGTTTAGC AGTTTCTTTG CAGCATTACT TATGTTAATT GATCCTATAA GTCATTTAAC TACGAATTTC AATGAGCTTC AACAAGGCCA AGCATCATTA AAGCGTTTAT TAGAAATTGA AACAGAACCA ATGGACATTG ATAATCGTCA CATTGGATCA ACCCTTATCT CTTCTCAATC AGATATTATA TTTGATAATG TATGTTTTTC TTATAGTAAT GGTCCACAAG TTATTAATAA TATAAAGTTA AATATAAAGA CTGGTAGTAT TGTAGCCCTT GTTGGACCCT CTGGATCAGG TAAAAGTACT ATATTCTCAT TATTACTAAG ATTTATTAGA CCTAAACATG GCACGATAAC TATTAATAAT ATAGATCTTC AAGGGATAAA AATAAATGAT ATCAGAAAAA AAATTTCTAT AGTTCCTCAA AGAGTAAACA TTTTATCTGG AACAATCTCT GAAGCTATTA ATTTTGGTAG ATCATTTAAA GAGGAAGAGA TTATCAATGC AGCAAAATTA GCCAATGCCC ATAAATTTAT ATCAGAAATG AGTAGCTCAT ACAACACATT TATAGAAGAA AGAGGAACAA ATTTATCAGG GGGCCAGCTA CAAAGAATCT CTATAGCAAG AGCTATTCTA GGTAATCCTT CTATTCTATT ATTAGATGAA GCTACTAGCG CACTTGATGC AGACTCAGAA ATAGCAGTTC AAACAGGTTT GTCCCAAGCC ATGAAAGGTA GGACTGTATT TATAATTGCG CATAGATTAT CTACCGTCCA AGAAGCAGAT CAAATTGTCT ATATTGAAAA TGGCAGTATT GTCCAAGTCG GGAGTCATGA TGAATTAATG AGTAAGAAAG GAAAGTATAG AGACTTATGT GAAAAGCAAT TTATAAGAGA TTTAGCAGAT TGA
|
Protein sequence | MISKSANSFL RFLPSLIPHS KELIWGGISM LIYVICWPVL AWLAGKLIPA IGIGDLELVI QIIIQALVVF LVQKIAQFSQ DILLAGPSLK ISQELRQDLF AKLQRIEVQS LEKLSSGDIA YRLTEDADRV GEVIYKTIQD TTPCIFQLVA VFGYMLYLDY KLALATLILA PVISLLVGNF GERVLLASEK SQKQVSTLAG LLGEGIQSLP LIRAFGVEEW FQSKFNVQVQ QHRRARYKSL KLLALQHPVV GFIEALGILL ILAIGAFRIQ NGGIDSEGFS SFFAALLMLI DPISHLTTNF NELQQGQASL KRLLEIETEP MDIDNRHIGS TLISSQSDII FDNVCFSYSN GPQVINNIKL NIKTGSIVAL VGPSGSGKST IFSLLLRFIR PKHGTITINN IDLQGIKIND IRKKISIVPQ RVNILSGTIS EAINFGRSFK EEEIINAAKL ANAHKFISEM SSSYNTFIEE RGTNLSGGQL QRISIARAIL GNPSILLLDE ATSALDADSE IAVQTGLSQA MKGRTVFIIA HRLSTVQEAD QIVYIENGSI VQVGSHDELM SKKGKYRDLC EKQFIRDLAD
|
| |