| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_09021 |
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| Symbol | cspR |
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| ID | 5730292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 800267 |
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| End bp | 800755 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641285267 |
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| Product | SpoU family tRNA/rRNA methyltransferase |
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| Protein accession | YP_001550787 |
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| Protein GI | 159903443 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.149348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000259965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAATGTTA AGCCTCACCA TTTAAAAGTT GCATTGTTTG AGCCTAGAAT CCCTCAAAAT
ACTGGTAATA TTGGGCGAAC ATGTGCAGCA TTTCAAATAC CACTGCATCT TATCAAGCCT
CTTGGATTTT CTTTAGATAG CAAACTTTTG AAAAGAGCTG GACTAGATTA TTGGGATTTT
ATTGATTTAA CAACACATGA GAATTTTTCT GCTTTTAAAA TACATATCTC AGATAAACGG
CTTATTGGAT TTAGTAAAAA AGATGGTATC CCATTGAATA AAATAACTTT TAAACCTGAG
GATGTTTTGC TTTTCGGAAG AGAGGATACT GGCCTGCCCG AAGATATAAG AGAAGCCTGT
GATTTAATGG TTTCCATTCC TATGCCTGGC AAGGCAGATT CGGATGGAAG TAATGGGGTT
AGAAGCCTTA ATCTCTCTTC TGCATGTGCA ATAGCTTCTT ATTCAGCGCT TGTTGACCAG
TTAAGTTAG
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| Protein sequence | MNVKPHHLKV ALFEPRIPQN TGNIGRTCAA FQIPLHLIKP LGFSLDSKLL KRAGLDYWDF
IDLTTHENFS AFKIHISDKR LIGFSKKDGI PLNKITFKPE DVLLFGREDT GLPEDIREAC
DLMVSIPMPG KADSDGSNGV RSLNLSSACA IASYSALVDQ LS
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