Gene P9211_08961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_08961 
Symbol 
ID5730269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp795050 
End bp796333 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content30% 
IMG OID641285261 
Productribonuclease II 
Protein accessionYP_001550781 
Protein GI159903437 
COG category[K] Transcription 
COG ID[COG0557] Exoribonuclease R 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000321128 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCAATG TATATAGTGA AGTAGTAAAT AAAGACTATA TACAATCAAT CTTAAACTCA 
TCAGTTAATT TATCTAGTAC AGATTATAAG GACCTAACTC ACCTTAAAAC CTATACTATT
GATGATATAG ATTCAGCAGA AATAGACGAC GGAGTATCCA TAGAGTATCT AGATAATTCA
ACTAAAATCT GGGTTCATAT AGCTAGTCCA GCAGAATATC TTAGTTTTGA AGATCCAATA
GATATAGAAG CATCGCTAAA AGCAGCAACA TGTTATTTGC CAGAATCTCC GGAATATATG
TTGCCTAATG ATTTAGTTAC AAAATTGCTA AGTCTTAAAC CAGGTAGAAT TAGTGCTGCA
TTAAGTGTCA GTGCTGAGAT TAATTCTGCA GGTGAAATTG TATCTTCAAA TTTATACAGG
ACAATTATAA AACCCACTAT AGCCTTAACT TATGAAGATG CTGATGATAT TTTAGACTTA
CAGCCTTTTG AAGAAAAGGA ATTAATAGAT CTAAGTATAC TAATGGGAAA TAGACGTAGC
TATAGGGTTA GTAAAGGTTC AATAAATATA GAAGAAGAAG AAGGTATTTT TTATTTTCAG
GATAATGTTA TAAAGCATAA AATTAAGGAT GTTACAAGAT TAAGAAAACT TGTTAGTGAA
TCAATGATTT TATTTGGTTA TATATTGGCT GATTTTTCAA AGACTAATAA AATATGCATC
CCATTCAGAG TCCAGAATCA ACAAAATATA AGCATAAATA CCAGTAAAGC CAATAACTAT
ATAGATAAGC ACATTTGTAA TTTTCTAATT AAGAACCAAT TGTCTAAGTC CTACATAAGT
CTCACCCCTG AAGCACATAC TAGTCTTGGC TTACCTGCTT ATGTACAAGC CACATCTCCT
TTAAGGAGGT ACATTGATCT TCTTACACAT TATCAAATAC TTAATTACCT TAAAGGCATT
AATCAAATAT CTGAGGATTT AGTATTAGAG AGAATAGATT TATTTAATTT AAGACATAAG
CAAGTTATTC AACGCTTTCG TTCAGCTAAA AGACAATTAT GCCTTAATTG GCTTGATCAA
TCAGAATATA AAGATTGGGA ATCTGTTTTC TTAAAGTGGT TAAACCCTTC TAAAAATTTA
GCCCTAATAT ATATTCCTAA GTTAAGAATT GACCTCAGTT GCAACTTCAT TAATTCAAAT
AACCCAACAT TAGGAAGTCG TATAGTTGTT TCAATTAAAT CTATTGATAC TCAAAAAGAT
TCTATTATGC TCAAGGTTTT ATAG
 
Protein sequence
MTNVYSEVVN KDYIQSILNS SVNLSSTDYK DLTHLKTYTI DDIDSAEIDD GVSIEYLDNS 
TKIWVHIASP AEYLSFEDPI DIEASLKAAT CYLPESPEYM LPNDLVTKLL SLKPGRISAA
LSVSAEINSA GEIVSSNLYR TIIKPTIALT YEDADDILDL QPFEEKELID LSILMGNRRS
YRVSKGSINI EEEEGIFYFQ DNVIKHKIKD VTRLRKLVSE SMILFGYILA DFSKTNKICI
PFRVQNQQNI SINTSKANNY IDKHICNFLI KNQLSKSYIS LTPEAHTSLG LPAYVQATSP
LRRYIDLLTH YQILNYLKGI NQISEDLVLE RIDLFNLRHK QVIQRFRSAK RQLCLNWLDQ
SEYKDWESVF LKWLNPSKNL ALIYIPKLRI DLSCNFINSN NPTLGSRIVV SIKSIDTQKD
SIMLKVL