| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_08711 |
|---|
| Symbol | ribB |
|---|
| ID | 5731071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 763503 |
|---|
| End bp | 765176 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641285236 |
|---|
| Product | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein |
|---|
| Protein accession | YP_001550756 |
|---|
| Protein GI | 159903412 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.851662 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0191524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATAG TTTTTGATCC GATAGCGGAT GGTTTAGCTG CTATTCGAAA TGGTGAGTGC
GTTGTAGTTG TAGATGATGA GAGTAGAGAG AATGAAGGTG ATTTGATTTG TGCTGCGCAA
TTTGCTACAC CACAACAAGT CAACTTTATG GCTACAGAGG CAAGAGGATT GATCTGTCTC
GCAATGGATG GAGAAAGGCT GGATCAACTA GATCTTCCTT TAATGGTAGA TAGGAATACT
GATTCGAATC AAACGGCTTT TACCATAAGC ATAGATGCTG GGCCTGAATA CGGTGTATCC
ACAGGAATAT CTGCAGAAGA TAGAGCGAGA ACGATTCAAG TAGCAATTAA TCCAAAAACT
AAACCCACTA ATTTAAGGCG ACCTGGTCAT ATATTTCCTC TAAAAGCAAA TAAAGGGGGA
GTACTAAAAA GAGCTGGCCA TACAGAAGCA GCTGTAGATT TGTCTTTATT GTCAGGTCTT
TCACCCGCGG GTGTTATTTG TGAGATCCAG AACTCCGATG GATCTATGGC ACGATTACCA
GAATTACAAC AATACGCGCG AAGTTGGGGA CTAAAAATAA TTAGTATTGC TGACCTTATT
AGATTTAGAC TAGAGAACGA GCGATTTGTA TATAGAAAAG CAATCACTAA GCTTCCAAGT
ATATTTGGCG AATTTAAAGC TATTGGTTAT AAAAATGAAT TAGATGGTAC AGAACATATC
GCATTAATAA AAGGTTCAGA AGCAGAGTTT AAAGAACCAG TACTTGTAAG AATGCATTCT
GAATGTCTTA CTGGTGATGC ATTTGGATCT CTAAGATGCG ATTGCAGACC ACAATTAGAG
GCTGCTTTAT CTCGTATTTC TAAAGAAGGC GAAGGAATAG TTGTATATCT AAGACAAGAA
GGTAGAGGTA TTGGACTAAT TAACAAGTTA AAGGCCTATA GCCTGCAAGA TGGTGGACTT
GATACTGTCG AGGCCAATGA AAAACTTGGG TTTCCCGCAG ATCTAAGAAA TTATGGAGTT
GGTGCGCAAA TACTTTCTGA CTTGGGAGTA CATAGACTTA AGTTATTAAC TAATAATCCT
AGAAAGATTG CTGGGTTAGG AGGTTATGGC CTGAAAGTAG AAAGCAGAGA GCCACTGGTT
ATATGCCCTA CGGACCATAA TGCAGCTTAT CTAGCAGTTA AAAGAACAAA GCTAGGTCAT
TATATAAGTG AAGAAGATAT AAATCCAGAA AAATATCTGG GTAAATCAAT AATTGCTTTC
TGGGATGGTG ATTATGATAT AGAAGATATA TCTATGTTAG AAAAAGGAGC GGAAAGTGCT
GCAACTTCCA GAAAGATAAA CTTAACCTCT CAGAATAGCT CAAGAGTAAA TGCATTACTA
GATCGACCAT TATTTATTTG GAGAGTAATA TTTGAAGAAA ATAAATATGT AAGTGAGGAA
AATATACAAA TCAAATCAAT TTATTCATTT GTTAAGGAAA TATCTGAGTG GGCCAATACA
AAAAGAGTGG GTATCTTGTT CTCTAAAACC CTAGAGCAAG CAATTCACCC ATCACACAAT
TTTAAGAATA TCAAGCTTAA GTTAAAGGAT TTAAATCAAA TAGATATCAA CAACGCCATT
GAAGAAAACA AAGGAAATCA GACCATTTCC TTGGCAATTA GTTGGATTGC CTAA
|
|---|
| Protein sequence | MNIVFDPIAD GLAAIRNGEC VVVVDDESRE NEGDLICAAQ FATPQQVNFM ATEARGLICL
AMDGERLDQL DLPLMVDRNT DSNQTAFTIS IDAGPEYGVS TGISAEDRAR TIQVAINPKT
KPTNLRRPGH IFPLKANKGG VLKRAGHTEA AVDLSLLSGL SPAGVICEIQ NSDGSMARLP
ELQQYARSWG LKIISIADLI RFRLENERFV YRKAITKLPS IFGEFKAIGY KNELDGTEHI
ALIKGSEAEF KEPVLVRMHS ECLTGDAFGS LRCDCRPQLE AALSRISKEG EGIVVYLRQE
GRGIGLINKL KAYSLQDGGL DTVEANEKLG FPADLRNYGV GAQILSDLGV HRLKLLTNNP
RKIAGLGGYG LKVESREPLV ICPTDHNAAY LAVKRTKLGH YISEEDINPE KYLGKSIIAF
WDGDYDIEDI SMLEKGAESA ATSRKINLTS QNSSRVNALL DRPLFIWRVI FEENKYVSEE
NIQIKSIYSF VKEISEWANT KRVGILFSKT LEQAIHPSHN FKNIKLKLKD LNQIDINNAI
EENKGNQTIS LAISWIA
|
|---|
| |