Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_07531 |
Symbol | alkB |
ID | 5730241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 658133 |
End bp | 658702 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641285116 |
Product | alkylated DNA repair protein |
Protein accession | YP_001550638 |
Protein GI | 159903294 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3145] Alkylated DNA repair protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0198174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCTT TAAGTAATAC CGAATGGTCC TATTTCCCAG CTTTAATTAG CCATAATCAG ACTGGTTACT GGAAAAATAT TATTCTAGAG AATCTTGAAT GGACTCAACC TGTCGTTAAG GTTTACTCAA AAAGATATTC TGTTCCTCGT TTAACAGCAT TTTTAGGAAG TAAAGGTATC TCATATAAAT ATAGTGGTGC TATTCATTAT GCGGAAGATT GGCCTAAATG GTTTTTTCCG TTGCTCGATT ATATCCGAGA CTTTTCTCGA ACAAATTATA ACGGCTGCCT AATAAACCTT TATAGAGATG GTAATGATTG CATGGGATGG CATTCAGATA ATGAGAAAGA GCTTGACCCT AAGAAATCAA TAGCTTCCTT ATCATTAGGT GCTACTAGAG ATTTTTTCTT TAGGAGCCTA ATAGATTCCT CAAGTAATAA TATTGAACTT AGAGACGGTG ATTTATTGTT AATGCACCCT GAATGCCAAT TTAATTGGAA ACATTGCTTG CCCAAAAGAA AGAAGGTTAG CGAAGTGAGA ATAAATCTAA CCTTTCGTTG TTATAGGTAA
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Protein sequence | MKSLSNTEWS YFPALISHNQ TGYWKNIILE NLEWTQPVVK VYSKRYSVPR LTAFLGSKGI SYKYSGAIHY AEDWPKWFFP LLDYIRDFSR TNYNGCLINL YRDGNDCMGW HSDNEKELDP KKSIASLSLG ATRDFFFRSL IDSSSNNIEL RDGDLLLMHP ECQFNWKHCL PKRKKVSEVR INLTFRCYR
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