Gene P9211_07401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_07401 
Symbol 
ID5730232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp643945 
End bp644658 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content36% 
IMG OID641285103 
Productshort-chain dehydrogenase/reductase 
Protein accessionYP_001550625 
Protein GI159903281 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0585348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.340687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAACAA TACTTATTAG TGGTGCCAAT AGAGGGATTG GTAGAAAAAT AGCAGAAAGA 
GCTGTTAAAG ATGGGGACCA AGTAAGTTTA GGAGTAAGAG ATTCAGATCA GTTAATAGGA
ACAAATCTAG ATCCAAACTT TAGTAGAAAT AAAAAGATTT TAATATGCAA GTATGAATCA
AAGAGCAAGC AAAGTGCTGA GAATTGGGTA AGGTGTACAA AAAACTATTT TGGTAAAATA
GATACTTTGA TTAATTGTGC TGGTAAATTC TCTAAAACAA AATTAATGTT TCAGGATAAT
GAGGTTAGCG AAATTGAAGA ACTCTGGAAA ACAAATGTAA TGGGGCCGTG GTATCTAACC
AGAGCAGCTT GGGAACATCT GTTAGAGCAA AACGATTCTA GAGTTATAAA CCTAGTTTCT
ATGAGCGGGA AAAGGTCAAA AGGATCATTA GCTGCCTATA CAACCACAAA GTTTGCACTA
ATGGGTCTTA GCCAAACCAT AAAAAATGAA GGCTGGGAGA AAGGAATTAG AGTGACAGCT
ATCTGCCCAG GGTGGGTAAA CACCGACATG GCGAAAGAAG TTAAAACGAT TAATAAAAGT
GATATGACTC AACCCGAAGA TCTTGCAGAA ATAATATCAA CAATACTTTC TATGCCTAAT
TCTTGTGTAC CTTTTGAAAT TTCAGTTAAC TGCAATCTAG AAAGGATGGT TTAA
 
Protein sequence
MRTILISGAN RGIGRKIAER AVKDGDQVSL GVRDSDQLIG TNLDPNFSRN KKILICKYES 
KSKQSAENWV RCTKNYFGKI DTLINCAGKF SKTKLMFQDN EVSEIEELWK TNVMGPWYLT
RAAWEHLLEQ NDSRVINLVS MSGKRSKGSL AAYTTTKFAL MGLSQTIKNE GWEKGIRVTA
ICPGWVNTDM AKEVKTINKS DMTQPEDLAE IISTILSMPN SCVPFEISVN CNLERMV