Gene P9211_07281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_07281 
SymbolhisS 
ID5730640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp635862 
End bp637133 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content37% 
IMG OID641285091 
Producthistidyl-tRNA synthetase 
Protein accessionYP_001550613 
Protein GI159903269 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.141798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.118541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGAGT TTCAAACTTT GCGAGGGATG GTAGACCTCT TGCCAATGCA AACTCAGCGT 
TGGCAAATAG TTGAGAATTT AGCTAGGCAT CACTTTCATA GAGCAGGTCT AAAAGAAATT
CGGACACCAC TTCTGGAAAT CACAGAATTA TTTGCAAGAG GTATAGGTGA GGCTACTGAT
GTAGTGGGAA AGGAGATGTA TACATTCTTG GACCGAGGTG ATCGATCGTG CACGCTCAGA
CCAGAAGGAA CGGCTTCAGT GGTTAGATCT GTTGTTCAGC ATGGTCTCTT GAATCAAGGG
CCTCAAAGGC TTTGGTATGG AGGGCCAATG TTTCGTTATG AACGCCCACA GGCTGGGAGA
CAAAGACAGT TTCATCAAAT GGGAGTTGAG TTTTTTGGTT TACCGTCAAT ACATGCCGAT
GCTGAATTGA TTTCTATTGC TTGGGATTTA TTGCAGGATT TAGGTTTAAA AGATTTAAAA
CTAGAATTAA ATAGTCTTGG TACATTTGAG GATAGACAAA ACTATCATGC TCGATTAAAT
GAATGGTTAG AATGTAATTT TAAATTGCTT GATAAGGATT CCCAAGATCG AATTCATAAG
AATCCTCTGC GAATATTAGA TACTAAAAAT CAATCAACAC AAGAACTTTT AAAAGATGCA
CCATTACTAA CAGATTATTT AAGTGATCTA AGCAAAGAAA GATTTTTGTG TTTACAAGAA
GCCCTACATA AACTGAAGAT ACCATTTGAT CTTAATCACA ATCTTGTAAG AGGACTTGAT
TATTATTGCC ATACAGCATT TGAAATTACT AGTAGTCAAT TGGGTGCCCA AGCAACTGTT
TGTGGAGGCG GTCGTTACGA TAGATTAGTT AAACAACTTG GCGGTCCAGA TACTCCCTCT
ATTGGATGGG CTATTGGAAT GGAGAGATTG ATTATCCTGC TAGAAGATTC TATTCATAAA
GAACAATTTG TTGATGTTTA TTTTATAAAT AGAGGGGAAT TGCCAGCAAT TGAGGCTCTT
TCTTTGACAA GGAAGTTAAG AGCATTCAAT ATTATTGTCG AATTAGATCA CTCCCAAGCA
AATTTTTCTA AGCAGTTTAA AAGGGCTAAC AGGTCTAATG CTAAATGGGC TATTATTATG
GGAGAAGATG AAATAGCTAA AGGAGAAATA CGTCTGAAAA GACTAACTTC TAGTATTAAT
GGAGATGGTT TTGATGAAAT TTGCTTTAGG AATTCTGAAT TTAATGAATT GGTTCACACA
TTAAAGAACT AA
 
Protein sequence
MTEFQTLRGM VDLLPMQTQR WQIVENLARH HFHRAGLKEI RTPLLEITEL FARGIGEATD 
VVGKEMYTFL DRGDRSCTLR PEGTASVVRS VVQHGLLNQG PQRLWYGGPM FRYERPQAGR
QRQFHQMGVE FFGLPSIHAD AELISIAWDL LQDLGLKDLK LELNSLGTFE DRQNYHARLN
EWLECNFKLL DKDSQDRIHK NPLRILDTKN QSTQELLKDA PLLTDYLSDL SKERFLCLQE
ALHKLKIPFD LNHNLVRGLD YYCHTAFEIT SSQLGAQATV CGGGRYDRLV KQLGGPDTPS
IGWAIGMERL IILLEDSIHK EQFVDVYFIN RGELPAIEAL SLTRKLRAFN IIVELDHSQA
NFSKQFKRAN RSNAKWAIIM GEDEIAKGEI RLKRLTSSIN GDGFDEICFR NSEFNELVHT
LKN