Gene P9211_07081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_07081 
SymbolumuD 
ID5730194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp621555 
End bp622016 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID641285071 
Productputative SOS mutagenesis protein UmuD 
Protein accessionYP_001550593 
Protein GI159903249 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0803785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTTG TGAATTTCCC TCAAGTACCA GTACCTCCTC ATGTCAAACC TATACAACTA 
TTTCTTCCTT TAGCAAATGA ATGCGTGGCA GCAGGTTTTC CCTCTCCTGC TGATGACTAC
ATTGATGCGG GGATTGATCT GAATGAACAT CTAATTCTCC ACCCAGCAAG CACCTTTTTC
CTGAAAGTAA AGGGTTTCTC CATGACTAAT GCAGGCATTC AGAACGGAGA CCTTTTAATA
GTAGATCGCA GCCTAGATGC TCAGCCGGGA TGCATAGTAG TGGCAATACT AGATGGGTGC
TTTACGCTAA AAAGGCTGAC TCGTCATAAA GAAACACTTT ACCTAGAAGC AGAGCACCCT
AACTACCCAG CAATTGACAT GCGTCATTAT GACAATGTTC AAATTTGGGG GGTCGCCATA
TATTCCATTC ACAAGCTCAC ACGTACTACT CAGTCGTTAT AA
 
Protein sequence
MFLVNFPQVP VPPHVKPIQL FLPLANECVA AGFPSPADDY IDAGIDLNEH LILHPASTFF 
LKVKGFSMTN AGIQNGDLLI VDRSLDAQPG CIVVAILDGC FTLKRLTRHK ETLYLEAEHP
NYPAIDMRHY DNVQIWGVAI YSIHKLTRTT QSL