Gene P9211_06981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_06981 
SymbolgatA 
ID5731877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp609651 
End bp611114 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content43% 
IMG OID641285061 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001550583 
Protein GI159903239 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.629931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.214805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCG CCGAATGGCG CCAAAGATTG AACAATCGAG AAATTTCCTC TCTTGAATTA 
GTCAATGAAC AATTTGCACG GATAAAAGAT GTAGACAATA AGCTACATGC TTTTTTAAAG
CTAGAAGAAG ATAGTGCTAG AGAAAATGCA AAAAGGATTG ATGAAGCCCG GTTATCTGGT
AAAGAGCTCC CACCTCTTGC AGGAATACCT TTTGCAATTA AAGATAATCT TTGCACTAAA
GGAGTAAAGA CAACTTGTTC AAGCAAAATG CTCGAAAGTT TTGTCCCTCC TTACGAGTCA
ACAGTTACCC AAAGGCTGTG GGAAGCTGGA GCAATTTTGC TGGGGAAAAC AAATCTTGAT
GAGTTTGCCA TGGGAAGCTC AACAGAGACT TCAGCATTCG GGGCGACCTC AAACCCATGG
GATCTGTCAC GCGTTCCAGG TGGGAGTTCT GGAGGCAGTG CAGCAGCAGT CGCCTCAGGA
CTTTGTCTTG CTGCTTTGGG CTCTGATACT GGGGGCTCTA TTAGACAACC AGCCTCTTTT
TGTGGCGTAG TGGGACTAAA ACCTACATAT GGCCGAGTAA GCCGTTGGGG GCTAGTCGCT
TTTGCTAGTT CTTTGGATCA GGTGGGGCCT TTTACTACAA GTGTTGAAGA TGCGGCAGAA
GTTTTGCAGG TTATAGCTGG GAAAGATCCA TTAGATTCAA CTTGCTTAGA TAAGCCAGTT
CCCAACTTTT CTGAATATTT CTCTGACTCT ATTAAGGGCT TACGTATTGG GTTAATTAAA
GAATGTTTTG AACAAGAAGG TATTTCCTTA GAGGTTAAAG AATCGGTCCT TAAAGCAGCA
AATCAACTTC AATCTCTTGG AGCAGAATTA ATAGATGTCT CTTGCCCGCG ATTTAATGAT
GGTATAGCAA CTTATTACGT AATTGCTCCT TCTGAAGCAT CAGCAAACCT TGCTCGTTAC
GACGGAGTTA AATATGGGTA TCGCCAACAT GGAGAAGAAA ATTTGTCGGC AATGACCTCA
TTAAGCCGGG CTAAGGGGTT TGGGAGTGAG GTCCAAAGGA GAATTTTGAT TGGGACCTAT
GCTCTTTCAG CTGGTTATTT CGATGCTTAT TACAAGAAAG CTCAAAAAGT AAGGACACTT
ATAAGTAGAG ATTTTGCTAA TTCGTTTGAA AAAGTGGATT TACTTTTGAC ACCAACATCT
CCATCAACTG CTTTTAAAGC TGGTTCACAT GACAACGATC CATTGGCAAT GTACCTATCG
GATTTATTGA CAATTCCAGT AAATCTGGCG GGCCTCCCTG CTATTTCCGT TCCATGTGGT
TTTGATAAAG AAGGCCTCCC AATAGGACTC CAACTAATTG GGGATGTTTT GGGAGAACAG
CGATTGCTTC AAGTGGCACA TCACTATGAA CAAGCAGCCA ATGTAATGGG AAATTGCCCT
AAGGGGGATT TGATACCAGC CTAA
 
Protein sequence
MTIAEWRQRL NNREISSLEL VNEQFARIKD VDNKLHAFLK LEEDSARENA KRIDEARLSG 
KELPPLAGIP FAIKDNLCTK GVKTTCSSKM LESFVPPYES TVTQRLWEAG AILLGKTNLD
EFAMGSSTET SAFGATSNPW DLSRVPGGSS GGSAAAVASG LCLAALGSDT GGSIRQPASF
CGVVGLKPTY GRVSRWGLVA FASSLDQVGP FTTSVEDAAE VLQVIAGKDP LDSTCLDKPV
PNFSEYFSDS IKGLRIGLIK ECFEQEGISL EVKESVLKAA NQLQSLGAEL IDVSCPRFND
GIATYYVIAP SEASANLARY DGVKYGYRQH GEENLSAMTS LSRAKGFGSE VQRRILIGTY
ALSAGYFDAY YKKAQKVRTL ISRDFANSFE KVDLLLTPTS PSTAFKAGSH DNDPLAMYLS
DLLTIPVNLA GLPAISVPCG FDKEGLPIGL QLIGDVLGEQ RLLQVAHHYE QAANVMGNCP
KGDLIPA