| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_05811 |
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| Symbol | |
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| ID | 5731459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 541387 |
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| End bp | 542325 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641284941 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001550466 |
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| Protein GI | 159903122 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCTT TAAGTGACTT TCTTGGAGAG ATCGGTCGCC ATCATCTATT AACCCCAGAA
GAAGAACTCA CGATGGGTAG GAAAGTCCAA GCAATGGTAG CTCTACTCGA AAAGAGCAAG
CTTTCAGAAG GCAAAGGGGA AGCATGTGAA TATACAGATT TAGAAAGAAG AACAATCAGG
CAGGGAGAAA GGGCAAAGAA TCAAATGATC ACATCAAACC TCAGACTTGT AGTAAATCTT
GCAAAAAGAT ATCAAGGGAA GGGGCTTGAT CTACTTGATC TAATTCAAGA AGGTACCCTT
GGTCTAACTA GGGCAGTAGA AAAATATGAT CCTAAGCGAG GCCATAGATT TTCTACATAT
GCTTATTGGT GGATTAGACA GGGTCTAAAC AGAGCACTTT CTACTCAAAG CAGAACTATA
AGGATTCCTG TAAACATCAA TGAAAAACTT ACTAAGCTTC GTGCTGCAAA ATCACAATTA
ATGCAAGCCA ATGGCTTGAC TCCCTCGTCA GAGATGCTTG CAAAAAAAAT GCATCTTTCT
AAAGAGGAAG TGGAAGAACT TCTGGAATGT GAGCTTCGAA GTATTACAGT CAGTTTGCAA
GGAGTAGTTC AATCGAAATC TGATCCCTCA GAGTTAGGAG ATGTGCTGCC TAGCGAGGAA
ATACCTCCTA TGGAAGTAGC AGAGTTGGCA GAGCGAAATG ATTCGGCATG GTCATTACTT
AACAAAGCCA ATCTGACCCC TAAAGAGAGA ACAATTGTCA GCCTACGTTT TGGCCTTGAT
GGATCAAATG AATGGAGAAC ACTTGCAGAA GTCGCCAAGC ACATGAACTG CAGCAGGGAA
TATTGCAGAC AAGTTGTTCA AAGAGCACTA AGGAAACTTC GAAAAACAGG TATCCAAAGT
GGCCTTGTTG AAGTAAACCA AGTGAACCAA GTGAACTAA
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| Protein sequence | MSSLSDFLGE IGRHHLLTPE EELTMGRKVQ AMVALLEKSK LSEGKGEACE YTDLERRTIR
QGERAKNQMI TSNLRLVVNL AKRYQGKGLD LLDLIQEGTL GLTRAVEKYD PKRGHRFSTY
AYWWIRQGLN RALSTQSRTI RIPVNINEKL TKLRAAKSQL MQANGLTPSS EMLAKKMHLS
KEEVEELLEC ELRSITVSLQ GVVQSKSDPS ELGDVLPSEE IPPMEVAELA ERNDSAWSLL
NKANLTPKER TIVSLRFGLD GSNEWRTLAE VAKHMNCSRE YCRQVVQRAL RKLRKTGIQS
GLVEVNQVNQ VN
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