Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_05641 |
Symbol | |
ID | 5730409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 526610 |
End bp | 528409 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641284923 |
Product | putative multidrug efflux ABC transporter |
Protein accession | YP_001550449 |
Protein GI | 159903105 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTTA AGGATTTCCA GAGACTTAAG CGACTTGGTA CATATCTTCG GAAGGACAGA AGAAGTCTTT CAATAATCCT TCTGATCATG ATCCCTGTGG CACTTGCAGG AGCGATTCAG CCTCTTTTGG TTGGTCAAGC AATAAGTGTC TTGAAAGGTG AGCCCACTCT CTCATTGCTC AATGGTTTAT CAATCAAAGC TTCTATAAGG TTTTTAGTTG GTTCTCTATT GATATCTGTT CTTTTGCGCT TAGCTCTTCA GGGCTATCAG TCATACAACA TTCAGAGGGT TGGTCAAAGA TTAACTGCCC GTATCAGAGC TGACTTGTTT TCTCATGCGA TGGCCTTGTC GTTGAGATAT CACGATTCAA TGCCTGTGGG TAAATTACTA ACACGACTTA CAAGCGATGT TGATGCTTTA TCAGAGGTCT TTGGAAGTGG CGCTGTAGGT GTAATTGCTG ACGTTGTCAG TCTTTTGGTT ATTGCAATAA CGATGCTTTT AATTGATTTA AAGCTTGGGC TTTTGTTATT ACTTACTCAA GTACCAGTGA TCTGGCTGAT TCTATGGCTC CAAAAAAGAT ACAGAAGGGC AAACTATCAA GTTCGTGAAG AGCTCTCACA ATTAAATGCA GATTTTCAAG AAAATTTGCA AGGTATTGAA GTTGTGCAGA TGTTTCGACG GGAATTGTTG AATGGGAAAT CATTCAACAA AACTGGAATG GCTTATAGAA AAGCGGTGAA TGGCACTATT TTTTATGACA GCAGTATTTC TGCATTCGTT GAATGGGTTT CTTTAGTTGT AGTGGCACTT GTTATTGTTC TAGGAGGCTG GTTGGTCACA CTTGGATCAA TGGGCTTAGG TACACTTACA ACCTTTATTC TTTATTCTCA ACGACTTTTT GAACCTTTAC GTCAATTAGC CGAAAGGTTT ACTCAGATTC AGGGAGGTTT AACAGCTGTA GAAAGGATTG GGGAGTTATT AGAAGAACAG GTAGAGATTG TCGACTATGG AGCCAGAAAT GTCTCTCCCT TGGTAGACGA TAACTCTTTA GAACCTCTAG CAAAGGGGGA AGTTGTTTTT GATAACGTAA GCTTTGCATA TAGGTCAGAT GAGCAAATCA TTAGTGACCT GAGCTTTACA ATTGCTCAAG GAGAGCACGT TGCTTTGGTT GGTCCAACTG GATCAGGTAA AACAACAGTA ATTAGATTGC TTTGTCGTTT ATATGAGCCA CAGAAAGGAC GAATACTTAT AGACGGTATT GATATCAGAG AAATTCCTTT GCAAACACTT CGTAGAAAGC TTGGAGTGGT TCTTCAAGAT ACTTTTTTAT TTAGTGGGAA TGTTTCGGAT AATCTTCGCT TAGACTCTTC TATAGATGAT GAAAGACTAA AGGCAATATG TGGTGAGCTC GGTCTGAACT CTTTGTTAAA GCGATTGCCT AATGGATTAA ATACCTTGTT AAGAGAACGA GGTGGGAATC TCTCTTCTGG GGAAAGGCAA CTATTGTCTG TTGCTAGGGT CGCTATTCGC AATCCAGATG TCTTGATTAT GGATGAAGCC ACTGCATTTA TGGACCCTTC TACCGAAGCA ACTTTGCAAA CGGATTTAGA ACGGTTACTT GATAGAAGAA CAGCATTGGT AATTGCTCAT CGCCTTGCGA CTGTGGAATC AGCTGACCGT ATTCTTGTGA TGCGAAAAGG GAAATTGATA GAAGAAGGCA CTCATGTCCA ATTGCGCTCT CAAGGAGGTC TTTATGCACA GTTGGCCGAA TTACAGGAAA GGGGCCTCGC GAGACTTTGA
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Protein sequence | MFFKDFQRLK RLGTYLRKDR RSLSIILLIM IPVALAGAIQ PLLVGQAISV LKGEPTLSLL NGLSIKASIR FLVGSLLISV LLRLALQGYQ SYNIQRVGQR LTARIRADLF SHAMALSLRY HDSMPVGKLL TRLTSDVDAL SEVFGSGAVG VIADVVSLLV IAITMLLIDL KLGLLLLLTQ VPVIWLILWL QKRYRRANYQ VREELSQLNA DFQENLQGIE VVQMFRRELL NGKSFNKTGM AYRKAVNGTI FYDSSISAFV EWVSLVVVAL VIVLGGWLVT LGSMGLGTLT TFILYSQRLF EPLRQLAERF TQIQGGLTAV ERIGELLEEQ VEIVDYGARN VSPLVDDNSL EPLAKGEVVF DNVSFAYRSD EQIISDLSFT IAQGEHVALV GPTGSGKTTV IRLLCRLYEP QKGRILIDGI DIREIPLQTL RRKLGVVLQD TFLFSGNVSD NLRLDSSIDD ERLKAICGEL GLNSLLKRLP NGLNTLLRER GGNLSSGERQ LLSVARVAIR NPDVLIMDEA TAFMDPSTEA TLQTDLERLL DRRTALVIAH RLATVESADR ILVMRKGKLI EEGTHVQLRS QGGLYAQLAE LQERGLARL
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