Gene P9211_05641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_05641 
Symbol 
ID5730409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp526610 
End bp528409 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content41% 
IMG OID641284923 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_001550449 
Protein GI159903105 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTTA AGGATTTCCA GAGACTTAAG CGACTTGGTA CATATCTTCG GAAGGACAGA 
AGAAGTCTTT CAATAATCCT TCTGATCATG ATCCCTGTGG CACTTGCAGG AGCGATTCAG
CCTCTTTTGG TTGGTCAAGC AATAAGTGTC TTGAAAGGTG AGCCCACTCT CTCATTGCTC
AATGGTTTAT CAATCAAAGC TTCTATAAGG TTTTTAGTTG GTTCTCTATT GATATCTGTT
CTTTTGCGCT TAGCTCTTCA GGGCTATCAG TCATACAACA TTCAGAGGGT TGGTCAAAGA
TTAACTGCCC GTATCAGAGC TGACTTGTTT TCTCATGCGA TGGCCTTGTC GTTGAGATAT
CACGATTCAA TGCCTGTGGG TAAATTACTA ACACGACTTA CAAGCGATGT TGATGCTTTA
TCAGAGGTCT TTGGAAGTGG CGCTGTAGGT GTAATTGCTG ACGTTGTCAG TCTTTTGGTT
ATTGCAATAA CGATGCTTTT AATTGATTTA AAGCTTGGGC TTTTGTTATT ACTTACTCAA
GTACCAGTGA TCTGGCTGAT TCTATGGCTC CAAAAAAGAT ACAGAAGGGC AAACTATCAA
GTTCGTGAAG AGCTCTCACA ATTAAATGCA GATTTTCAAG AAAATTTGCA AGGTATTGAA
GTTGTGCAGA TGTTTCGACG GGAATTGTTG AATGGGAAAT CATTCAACAA AACTGGAATG
GCTTATAGAA AAGCGGTGAA TGGCACTATT TTTTATGACA GCAGTATTTC TGCATTCGTT
GAATGGGTTT CTTTAGTTGT AGTGGCACTT GTTATTGTTC TAGGAGGCTG GTTGGTCACA
CTTGGATCAA TGGGCTTAGG TACACTTACA ACCTTTATTC TTTATTCTCA ACGACTTTTT
GAACCTTTAC GTCAATTAGC CGAAAGGTTT ACTCAGATTC AGGGAGGTTT AACAGCTGTA
GAAAGGATTG GGGAGTTATT AGAAGAACAG GTAGAGATTG TCGACTATGG AGCCAGAAAT
GTCTCTCCCT TGGTAGACGA TAACTCTTTA GAACCTCTAG CAAAGGGGGA AGTTGTTTTT
GATAACGTAA GCTTTGCATA TAGGTCAGAT GAGCAAATCA TTAGTGACCT GAGCTTTACA
ATTGCTCAAG GAGAGCACGT TGCTTTGGTT GGTCCAACTG GATCAGGTAA AACAACAGTA
ATTAGATTGC TTTGTCGTTT ATATGAGCCA CAGAAAGGAC GAATACTTAT AGACGGTATT
GATATCAGAG AAATTCCTTT GCAAACACTT CGTAGAAAGC TTGGAGTGGT TCTTCAAGAT
ACTTTTTTAT TTAGTGGGAA TGTTTCGGAT AATCTTCGCT TAGACTCTTC TATAGATGAT
GAAAGACTAA AGGCAATATG TGGTGAGCTC GGTCTGAACT CTTTGTTAAA GCGATTGCCT
AATGGATTAA ATACCTTGTT AAGAGAACGA GGTGGGAATC TCTCTTCTGG GGAAAGGCAA
CTATTGTCTG TTGCTAGGGT CGCTATTCGC AATCCAGATG TCTTGATTAT GGATGAAGCC
ACTGCATTTA TGGACCCTTC TACCGAAGCA ACTTTGCAAA CGGATTTAGA ACGGTTACTT
GATAGAAGAA CAGCATTGGT AATTGCTCAT CGCCTTGCGA CTGTGGAATC AGCTGACCGT
ATTCTTGTGA TGCGAAAAGG GAAATTGATA GAAGAAGGCA CTCATGTCCA ATTGCGCTCT
CAAGGAGGTC TTTATGCACA GTTGGCCGAA TTACAGGAAA GGGGCCTCGC GAGACTTTGA
 
Protein sequence
MFFKDFQRLK RLGTYLRKDR RSLSIILLIM IPVALAGAIQ PLLVGQAISV LKGEPTLSLL 
NGLSIKASIR FLVGSLLISV LLRLALQGYQ SYNIQRVGQR LTARIRADLF SHAMALSLRY
HDSMPVGKLL TRLTSDVDAL SEVFGSGAVG VIADVVSLLV IAITMLLIDL KLGLLLLLTQ
VPVIWLILWL QKRYRRANYQ VREELSQLNA DFQENLQGIE VVQMFRRELL NGKSFNKTGM
AYRKAVNGTI FYDSSISAFV EWVSLVVVAL VIVLGGWLVT LGSMGLGTLT TFILYSQRLF
EPLRQLAERF TQIQGGLTAV ERIGELLEEQ VEIVDYGARN VSPLVDDNSL EPLAKGEVVF
DNVSFAYRSD EQIISDLSFT IAQGEHVALV GPTGSGKTTV IRLLCRLYEP QKGRILIDGI
DIREIPLQTL RRKLGVVLQD TFLFSGNVSD NLRLDSSIDD ERLKAICGEL GLNSLLKRLP
NGLNTLLRER GGNLSSGERQ LLSVARVAIR NPDVLIMDEA TAFMDPSTEA TLQTDLERLL
DRRTALVIAH RLATVESADR ILVMRKGKLI EEGTHVQLRS QGGLYAQLAE LQERGLARL