| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_05521 |
|---|
| Symbol | rbcL |
|---|
| ID | 5731046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 517060 |
|---|
| End bp | 518472 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641284911 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_001550437 |
|---|
| Protein GI | 159903093 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGA AGTATGACGC TGGGGTTAAG GAGTACAGAG ACACCTACTG GACTCCGGAA
TACGTACCCC TAGACACAGA CCTTTTGGCT TGCTTTAAAT GCACTGGCCA AGAAGGAGTC
CCTAGAGAGG AAGTAGCAGC TGCTGTTGCT GCCGAATCAT CAACAGGTAC TTGGTCCACT
GTGTGGTCTG AGTTGTTGAC CGACCTCGAA TTTTACAAGG GTCGTTGTTA TCGCATTGAA
GATGTACCTG GAGACAAGGA GTCTTTTTAT GCGTTTATAG CTTATCCTCT CGATCTTTTT
GAAGAAGGAT CCATTACAAA CGTTCTAACC TCTTTGGTTG GAAACGTATT TGGTTTTAAA
GCTTTACGCC ATCTTCGTTT AGAAGATATT CGTTTCCCAA TGGCTTTCAT TAAGACCTGT
GGTGGTCCTC CTAATGGAAT CGTTGTTGAA AGAGACCGTT TAAATAAGTA TGGTCGTCCC
TTACTTGGTT GCACAATTAA GCCAAAACTT GGTCTTTCTG GAAAGAATTA TGGCCGAGTA
GTTTATGAGT GTCTTCGTGG TGGCTTGGAC CTTACTAAAG ATGATGAGAA CATAAACTCA
CAACCTTTCC AGAGATGGAG AGAGCGTTTC GAATTTGTAG CTGAAGCTGT CAAGCTGGCT
CAACAAGAAA CTGGTGAAGT TAAAGGTCAT TATCTTAACT GCACAGCGAC TACTCCTGAG
GAGATGTATG AGCGTGCTGA GTTTGCAAAA GAACTCGACA TGCCCATAAT CATGCATGAC
TACATAACAG GTGGCTTTAC TGCTAATACA GGACTAGCCA ACTGGTGTAG AAAGAATGGC
ATGCTTCTCC ATATCCACAG GGCAATGCAT GCGGTGATTG ACCGTCATCC AAAGCATGGT
ATTCACTTCC GTGTATTGGC TAAGTGCTTG CGACTATCTG GTGGAGATCA GCTTCATACA
GGAACTGTTG TTGGAAAACT AGAAGGTGAT CGCCAGACCA CTCTTGGCTA TATAGATAAC
CTACGTGAAT CCTTTGTCCC TGAAGATAGG ACTCGAGGCA ACTTCTTCGA TCAGGATTGG
GGCTCTATGC CAGGTGTATT TGCCGTTGCT TCAGGCGGTA TACACGTTTG GCATATGCCA
GCGCTGTTAG CTATTTTTGG CGACGACTCT TGTCTCCAGT TTGGTGGTGG TACTCATGGA
CATCCATGGG GATCTGCTGC TGGCGCGGCT GCTAACCGAG TTGCTCTTGA GGCTTGTGTT
AAAGCACGTA ATGCCGGTAG AGAGATTGAG AAAGAAAGCC GTGACATCTT GATGGAAGCA
GCGAAGCATA GCCCTGAGTT GGCTATAGCC CTTGAGACCT GGAAAGAGAT CAAGTTTGAG
TTCGATACGG TTGACAAGTT AGACGTTCAA TAG
|
|---|
| Protein sequence | MSKKYDAGVK EYRDTYWTPE YVPLDTDLLA CFKCTGQEGV PREEVAAAVA AESSTGTWST
VWSELLTDLE FYKGRCYRIE DVPGDKESFY AFIAYPLDLF EEGSITNVLT SLVGNVFGFK
ALRHLRLEDI RFPMAFIKTC GGPPNGIVVE RDRLNKYGRP LLGCTIKPKL GLSGKNYGRV
VYECLRGGLD LTKDDENINS QPFQRWRERF EFVAEAVKLA QQETGEVKGH YLNCTATTPE
EMYERAEFAK ELDMPIIMHD YITGGFTANT GLANWCRKNG MLLHIHRAMH AVIDRHPKHG
IHFRVLAKCL RLSGGDQLHT GTVVGKLEGD RQTTLGYIDN LRESFVPEDR TRGNFFDQDW
GSMPGVFAVA SGGIHVWHMP ALLAIFGDDS CLQFGGGTHG HPWGSAAGAA ANRVALEACV
KARNAGREIE KESRDILMEA AKHSPELAIA LETWKEIKFE FDTVDKLDVQ
|
|---|
| |