| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_05391 |
|---|
| Symbol | trpF |
|---|
| ID | 5730993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 505835 |
|---|
| End bp | 506503 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641284898 |
|---|
| Product | phosphoribosylanthranilate isomerase |
|---|
| Protein accession | YP_001550424 |
|---|
| Protein GI | 159903080 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCATC AACCAACTGT AGCTGTAAAA ATCTGTGGCA TCACAAAAAT CAATCAAGCT
TTAGAGATAG CTTCTTTAGG AGTAAATGCT ATTGGCATCG TAGGAGTTAA AGCTTCTCAA
CGTTATATCC CAAACAAACA AAGGCGAGAA TTGTTTAGGG CTCTAGAAGA GAATTATCCG
AAGACAGAAA GAGTTTGGGT TGTCGCAGAT CCAAGCGAAA AAGAGATTTC AGAAGTTTTA
AGTGGAGATG GTCGTCCATC AATTATTCAG CTTCACGGCA AAGAATCCAT GGAAGTCTGT
AGACAGCTAA AGAATAAATA TCCTTTTTTT CAGTGGTGGA AGGCTTTAAG AATTCGCCAA
CAAGAAGATC TTCTTATTGC CCAGAAATAT CAAGATCACG CTGATTCAAT ACTTCTTGAT
ACATGGAGCA GCAAGGTTCT TGGAGGCACA GGGGATAGAT TGCCACTTGA ATGGCTAACA
AAAATCAATT ACCAGAAACC ATGCTGGATC GCTGGAGGAG TTTCCGCTGA ATGGATACCA
GAACTTCTTT CAAAAGTTCA ACCTTTTGGA TTGGATGCGT CTAGCAAGTT GGAAGATTCA
CCAGGAATAA AAGATATTAA AAAAGTGAAA TCTCTTTTAC AAGCTATAAA AGGACAAACA
ATGAATTAG
|
|---|
| Protein sequence | MRHQPTVAVK ICGITKINQA LEIASLGVNA IGIVGVKASQ RYIPNKQRRE LFRALEENYP
KTERVWVVAD PSEKEISEVL SGDGRPSIIQ LHGKESMEVC RQLKNKYPFF QWWKALRIRQ
QEDLLIAQKY QDHADSILLD TWSSKVLGGT GDRLPLEWLT KINYQKPCWI AGGVSAEWIP
ELLSKVQPFG LDASSKLEDS PGIKDIKKVK SLLQAIKGQT MN
|
|---|
| |