| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_04551 |
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| Symbol | ispD |
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| ID | 5731020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 428534 |
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| End bp | 429214 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641284812 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001550340 |
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| Protein GI | 159902996 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.201208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCATTTGC TAATTGCAGC AGCAGGTAGT GGCAGCCGAA TGGGTGCAGA TTGCAACAAG
TTGTTGTTGC AAATAGAGGG AGAACCCATC TTAAAATGGA CTTTAGAGTC AGTTGCTTTG
GCTAGTTCAA TTAAATGGAT TGGCATTATT GGCCAGCCTT GCGATAAACA TGCAATTATG
CAGATTGTTC AGGATTTTTC TAAACCTGTC CAATGGATAA ATGGGGGTAA AACGCGTCAA
GAGTCAGTTC AAAAAGGATT AGCTGCTTTG CCTGATGAAG CAATACATGT ATTAATACAC
GATGGAGCTA GATGTTTAGT AGAGCCTGAG TTGTTTGATC AGTGTGCACA GATGGTTTTG
AAGGGTGTTG CCATCATTGC TGCCACGCCA GTTGTCGACA CAATAAAGAC AGTTGATAGT
AATGGTTATA TATCAGGTAC TCCAGATAGA TCTAAATTGT GGGCCGCTCA AACGCCCCAG
GGATTTTCAG TTGAACAACT CAAGGAAGGT CATGCGACAG CTATTGCTAA AAATTGGAAT
GTCACAGATG ATGCTTCACT TTTCGAAAAA CTAGCCTGGC CAGTAAGGAT TCTCGAATCT
TCTCCATCAA ATATAAAGGT CACAACTCCA TTTGATTTGT CAATTGCCCA GTCAATAATT
GCTATGAAGA GACAATCCTA A
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| Protein sequence | MHLLIAAAGS GSRMGADCNK LLLQIEGEPI LKWTLESVAL ASSIKWIGII GQPCDKHAIM
QIVQDFSKPV QWINGGKTRQ ESVQKGLAAL PDEAIHVLIH DGARCLVEPE LFDQCAQMVL
KGVAIIAATP VVDTIKTVDS NGYISGTPDR SKLWAAQTPQ GFSVEQLKEG HATAIAKNWN
VTDDASLFEK LAWPVRILES SPSNIKVTTP FDLSIAQSII AMKRQS
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