Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_04471 |
Symbol | ccmA |
ID | 5731156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 422267 |
End bp | 423280 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641284804 |
Product | putative multidrug efflux ABC transporter |
Protein accession | YP_001550332 |
Protein GI | 159902988 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.797798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGG TTGAACTGCA TGATCTCGTG AAGTCTTATG GCTCAGTAAA GGCTTTGAAT AAATTGAGCT TAAGAGTTCC GGAGGGCTCT CTTTTTGGTC TTCTTGGTCC GAATGGTTCC GGTAAGAGTA CTACTTTGAG AATCCTTTGT ACTTTGTTAG CACCGGATTC AGGTAATGCG ATAGTGGCAG GCGTAGATGT TTTAAAGAAC CCTCGCTATA TAAGGCAAAA CATTGGTTAT GTAGCTCAGG AAATTGCAAT TGATAAAATC CTTTCTGGAA GAGAACTTCT CCAATTACAT GGCGATCTTT ATCATTTGAG TAGAAATGAT CGGGATCTAC GTATAGAAGA GTTGGTTCGT CAACTTGAGA TGGGTGAATG GGTTGATCGA CGCTTAGGTT CTTATTCAGG CGGTATGAAA AGAAGGCTTG ACCTTGCTTC TGGTTTACTG CATCAGCCCA AGTTATTGAT TTTGGATGAA CCAACCGTTG GCTTGGACAT AGAGAGTAGG TCAACGATCT GGAACTTATT AAGAGATCTT CGAGAAAAAG GAACAACAAT TCTTCTTAGT AGTCATTACC TTGAGGAGGT TGATGCACTC GCTGACCAGA TGGCGATTAT TGACAAAGGA CAAGTCATTG GGTATGGATC ACCTCAAGAG CTTAAAGATA AATTAGGAGG TAATCGCATA ACACTTAAAG TGAGGGAATT TAGTGATGAA AGAGAATCAG AGAAAATAAA ACAATTGGTA AAAGAAATTG AGGGAGTGGG AAAAGTTGTT GTGAATAGAG CACAGGGATT CTCATTAAAC CTTGTCGTTG ATGATCAAGA TGTTTTGCAA AAGTTGAGGG CAAAGTTAAC TGAGTCAGGA TTCGATGTAT TCGCTTTATC TGAAAGTCGA CCAAGCTTGG ATGATGTTTA CTTGCAGGCA ACTGGCCGAA CAATTGCAGA TGTAGAATTG GAGGTAGCTG GCAAGCGGGA TATTAAGGGC GAGGCAAAGA AGTCAATGAG GTGA
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Protein sequence | MSLVELHDLV KSYGSVKALN KLSLRVPEGS LFGLLGPNGS GKSTTLRILC TLLAPDSGNA IVAGVDVLKN PRYIRQNIGY VAQEIAIDKI LSGRELLQLH GDLYHLSRND RDLRIEELVR QLEMGEWVDR RLGSYSGGMK RRLDLASGLL HQPKLLILDE PTVGLDIESR STIWNLLRDL REKGTTILLS SHYLEEVDAL ADQMAIIDKG QVIGYGSPQE LKDKLGGNRI TLKVREFSDE RESEKIKQLV KEIEGVGKVV VNRAQGFSLN LVVDDQDVLQ KLRAKLTESG FDVFALSESR PSLDDVYLQA TGRTIADVEL EVAGKRDIKG EAKKSMR
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