| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_04391 |
|---|
| Symbol | ribE |
|---|
| ID | 5731330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 415730 |
|---|
| End bp | 416395 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641284796 |
|---|
| Product | riboflavin synthase subunit alpha |
|---|
| Protein accession | YP_001550324 |
|---|
| Protein GI | 159902980 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACAG GTCTTATTCA AGCAGTAGCT AAGGTTCAAT ACCAAGGTAA TAACCTATTT
GTAGAGGGGA ATGAGCTGCC TTTTTCAATC AATATTGGTG ACAGTGTTTC AGTTGATGGG
GTTTGTTTAA CAATCGCAGC TTTTCGTGGA AATGGTTTTT TGGCAAATAT AAGTGAAGAA
ACTTTACAAC GAACAACTCT TGGTAAGAAA GCTGCAGAGA AGGGCTTTGT GAACCTTGAA
CCAGCACTTT GTCTCTCTGA TCGGTTAGGC GGACACTTGG TAAGTGGACA TGTTGATGGA
CTAGGGACCG TAAGCTCTCT AGATAACTTA CCTAATTCAT GGAATTTAGA AATTAATTGG
CAAAATAGTA GCTTTGCAAA ATATATATGT GATAAAGCAA GCATTTGCTT AAATGGCATA
AGCCTTACTG TCTCCGGACA GAAAAAAGAA GGGAAGGTCT TCTCAATAGC TGTAATTCCT
CATACTTGGA TCAATACCTC TTTGCAATAT CTGCGCATAG GTGACTTGGT GAACCTTGAG
GCGGATCTTA TGGCTAAATA TGCCGAAAAA CTATTATTAG AAAGATTTCC CTCCAATAAT
CAAAAACTTA GTAATAACCA ACCTGATATC TCCACTGATT GGTTGGTGAA TCAGGGCTGG
CAATAA
|
|---|
| Protein sequence | MFTGLIQAVA KVQYQGNNLF VEGNELPFSI NIGDSVSVDG VCLTIAAFRG NGFLANISEE
TLQRTTLGKK AAEKGFVNLE PALCLSDRLG GHLVSGHVDG LGTVSSLDNL PNSWNLEINW
QNSSFAKYIC DKASICLNGI SLTVSGQKKE GKVFSIAVIP HTWINTSLQY LRIGDLVNLE
ADLMAKYAEK LLLERFPSNN QKLSNNQPDI STDWLVNQGW Q
|
|---|
| |