| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_04181 |
|---|
| Symbol | lepA |
|---|
| ID | 5730565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | + |
|---|
| Start bp | 393475 |
|---|
| End bp | 395283 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641284775 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_001550303 |
|---|
| Protein GI | 159902959 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.570977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATG TCCCTGTTTC TCGGTTGAGG AACTTTTGCA TAATTGCTCA TATAGATCAC
GGGAAGTCCA CGCTTGCGGA CCGGCTTTTG CAAGATACGG CTACAGTCGC TTCTCGGGAT
ATGCAAGATC AATTTTTGGA CAACATGGAG CTTGAGAGAG AGAGAGGAAT AACTATTAAA
TTACAGGCTG CGAGGATGAA ATATACCGCT ACCGATGGTA ACGAATATGT ACTTAATTTG
ATTGACACTC CAGGCCATGT TGACTTTTCT TATGAAGTTA GCCGCTCCTT GCAGGCTTGC
GAAGGGGCCC TATTGGTTGT AGATGCAAGT CAGGGGGTTG AAGCTCAGAC ATTGGCAAAT
GTCTACTTAG CTTTAGAAAA TGATTTGGAA ATTATTCCTG TTCTAAACAA AGTTGATTTA
CCAGGCTCTG ACCCTGAGAA AATTAAAAAA GAAATTGAGT CAATTATTGG GCTGGATACT
TCTCAAGCAA TTTCTTGTTC CGCCAAAACA GGTTTAGGAG TTACTGATAT TCTTCAAGCA
GTTGTTGAAC GTGTTCCGCC ACCCAAAGAT ACGTTAGAAC AGGCAACCCA AGCATTGATT
TTTGACTCTT ATTACGATCC ATATAGAGGA GTGATTGTTT ATTTTCGAGT AACTGCAGGA
AGTATTTCAG CAAGAGATCA AATTCTATTG ATGGCGAGTA AGAAGAGCTA TGAGCTTGAC
GAGATCGGAA TCATGGCACC AGACCAACAA AAGGTCAATG AACTACATGC AGGAGAAGTT
GGTTATTTAG CGGCATCGAT TAAAGCGGTA TCAGATGCTC GAGTTGGTGA CACCATTACT
TTACTTAATG CTCCCGCGGC TGACCCATTG CCAGGCTATA CAGAAGCAAA GCCAATGGTA
TTTTGCGGTC TTTTCCCTAC TGATGCAGAT CAATATCCTG ACTTAAGAGA AGCCTTAGAG
AAATTACAGC TTTCAGACGC TGCTTTGAAG TATGAACCTG AAACAAGTAG TGCTATGGGG
TTTGGTTTTA GATGTGGCTT CCTTGGTCTC CTTCACATGG AGATCGTTCA GGAAAGATTA
GAGCGAGAAT ATGATTTGGA CTTAATAGTG ACAGCCCCGT CAGTAATTTA TCAAGTCAAC
ATGCTTAATG GGGAAGCCCT GATGATAGAT AATCCTGCGA CTTTGCCTGA CCCGCAACAC
CGAGACTCTA TAGAAGAGCC ATATGTTCGT ATGGAGATTT ATGCTCCTAA TGATTACAAT
GGAACTCTGA TGGGCCTTTG CCAGGATCGA CGGGGTGAAT TCGTAGATAT GAAGTATATA
ACTACAGATA GGGTGACACT TATTTATGAG ATGCCTCTTG CTGAGGTGGT AACTGATTTC
TTCGATCAAA TGAAGAGTCG GACTAAAGGA TATGCTTCCA TGGAATACCA TTTAATTGGT
TATCGTAAAA ATGATTTGGT TCGCTTAGAT GTCTTGATTA ATTCAGACAA GGCAGATCCA
TTAACTACAA TTGTTCATCG TGATAAGGCT TATGGGGTAG GGAGGGCACT GGTCGATAAG
TTAAAAGAGC TTATCCCTAG GCAGCAGTTT AAAATACCTT TACAAGCTTC TATTGGCAGT
AGAATTATTG CAAGTCAGAA TATCAGTGCC TTACGTAAGG ATGTTTTAGC AAAGTGTTAC
GGTGGTGATA TCTCACGAAA GAAAAAATTA CTTCAAAAGC AAGCGAAAGG CAAGAAAAGA
ATGAAGTCTA TGGGTAAGGT CGATGTACCT CAAGAGGCAT TTATGGCTGT ATTGAAGTTG
AATTCATAG
|
|---|
| Protein sequence | MTNVPVSRLR NFCIIAHIDH GKSTLADRLL QDTATVASRD MQDQFLDNME LERERGITIK
LQAARMKYTA TDGNEYVLNL IDTPGHVDFS YEVSRSLQAC EGALLVVDAS QGVEAQTLAN
VYLALENDLE IIPVLNKVDL PGSDPEKIKK EIESIIGLDT SQAISCSAKT GLGVTDILQA
VVERVPPPKD TLEQATQALI FDSYYDPYRG VIVYFRVTAG SISARDQILL MASKKSYELD
EIGIMAPDQQ KVNELHAGEV GYLAASIKAV SDARVGDTIT LLNAPAADPL PGYTEAKPMV
FCGLFPTDAD QYPDLREALE KLQLSDAALK YEPETSSAMG FGFRCGFLGL LHMEIVQERL
EREYDLDLIV TAPSVIYQVN MLNGEALMID NPATLPDPQH RDSIEEPYVR MEIYAPNDYN
GTLMGLCQDR RGEFVDMKYI TTDRVTLIYE MPLAEVVTDF FDQMKSRTKG YASMEYHLIG
YRKNDLVRLD VLINSDKADP LTTIVHRDKA YGVGRALVDK LKELIPRQQF KIPLQASIGS
RIIASQNISA LRKDVLAKCY GGDISRKKKL LQKQAKGKKR MKSMGKVDVP QEAFMAVLKL
NS
|
|---|
| |