| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_04081 |
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| Symbol | rpsD |
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| ID | 5730271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 385033 |
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| End bp | 385641 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641284765 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001550293 |
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| Protein GI | 159902949 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGAT ACCGTGGACC TCGACTGAGG ATCACGCGTC GCTTGGGAGA TCTACCAGGT
CTCACCCGGA AGGCTGCAAA ACGGTCTAAT CCGCCAGGTC AGCACGGCCA AGCCCGTCGC
AAGCGCTCTG AATACGCGAT CCGTCTAGAA GAAAAGCAAA AGCTGCGCTT TAATTACGGA
ATCTCTGAAA GACAGCTTGT CAGGTATGTA AAAAAAGCTC GTTCCCTTGA AGGTTCTACG
GGAACAAACC TTTTAAAGTT ATTAGAAAAT AGGCTAGATA ATGTTTGTTT TAGGCTTGGA
TTTGGCCCTA CGATTCCTGG ATCACGCCAA CTAGTCAACC ATGGCCATGT CACTGTCAAT
GGCAAGGTCC TAGACATAGC AAGCTATCAA TGCAAACCAG GTGATGTGAT CTCAATTAGA
GAAAAAAAAG GCAGCAAAAA ATTAGCCGAA GGGAACTTAG AATTCCCAGG CCTTGCGAAT
GTGCCTCCAC ATCTGGAATT TGAAAAGTCA AAAATGTCAG CGAAAATTAC TGGGAAGTGC
GAGCGCGAAT GGGTCGCAAT AGAAATTAAT GAGTTGCTAG TTGTAGAGTA CTACTCACGT
AAAGTCTAA
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| Protein sequence | MSRYRGPRLR ITRRLGDLPG LTRKAAKRSN PPGQHGQARR KRSEYAIRLE EKQKLRFNYG
ISERQLVRYV KKARSLEGST GTNLLKLLEN RLDNVCFRLG FGPTIPGSRQ LVNHGHVTVN
GKVLDIASYQ CKPGDVISIR EKKGSKKLAE GNLEFPGLAN VPPHLEFEKS KMSAKITGKC
EREWVAIEIN ELLVVEYYSR KV
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