Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_02901 |
Symbol | amtB |
ID | 5730790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 273791 |
End bp | 275221 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641284636 |
Product | ammonium transporter |
Protein accession | YP_001550175 |
Protein GI | 159902831 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTG CTTTGCAGAC TCCCTCAAGT CGTCGAGTTG AACGACTTCA AGAGGCAAGT CTATTAAGAG GGCCGATGCT TCTTTTGAAG AGCATAAGAG GATTTAATTC TCGTAGTTCT TTAATTTGGC TTGCTTGTGT CCCTCTTGCC CTATTTGGTT TAGGACTATT TAACCTTTCA GCGCATGCAG GAGATTTTGC GCTTACCACT CAAGCACTTG CAGACAATCT TTGGATAATG GTTGCCGCAG TGTTAGTAAT TTTCATGAAT GCAGGCTTTG CGATGGTGGA AGCCGGCATG TGTAGGCAGA AAAATGCTGT CAACATTCTT GCTAAGAACC TAATAGTGTT TACTCTTGCA GTATCTGCTT ATTGGTTTAT TGGGTATAAA TTGATGTATA CAGGCTCTTG GGTCATTCCA GGGGTTTTGA AATTAGGTAC TCCTTTCTTT AATCCAGCAC CTACTGATCC AGCTGGATTG GTTCCAAGTA TTGACTTTCT GTTCCAAGCT GCTTTTGCTG GTACAGCCGC AACGATTGTT TCAGGAGTAG TTGCTGAAAG AATCAAGTTT GGTGAGTTTG TCGTTTTTTC ATTAGTCCTT ACAGCAGTTA TTTATCCGAT TGCTGGATCT TGGCAATGGA ATGGTGATGG ATGGTTGGCT CAGTTGGGTT TTTATGACTT TGCAGGATCT AGTATTGTTC ACTCAGTTGG AGCATGGGCT GGCCTTATTG GTGCAATTGC TTTAGGTCCA CGGATTGGAA AATTTGTGGA TGGTAGGTCT CAGGCTTTAC CAGGGCACAA TATGGCTATT GCAACTCTTG GAGCATTGAT CCTTTGGATT GGTTGGTATG GATTCAATGG CGGCTCAGTG CTTGCTTTTA ACGAAGCAGT TCCATATGTC GCTGTTACAA CTACTCTTGG TGCTGCTGGT GGAGGTATAG CAGCCACATT GTTGAGTCAG TTAAATACTG GAAAACCAGA TTTAACAATG ACTATCAATG GCATTTTGGC AGGGCTCGTA AGTGTTACTG CTGGCGCGGA TGGACTTAGC TTGTGGTCTT CTTGGCTTGT CGGAGCAATC GGTGGACTTC TAGTTGTTTG GTCAGTTGCT TTTGTTGATG GTCTTCAGAT CGATGACCCT GTTGGGGCTG TTTCAGTGCA TGGTACATGT GGGGTATGGG GAACTCTTGC TGTTGGCCTT TTTTATGGAG GAAAAGGAGT TTTTGCAGGA GGCACTCTTT CTCAGCTTTT AATTCAAGCT GTTGGTGCAG CAAGCTATGC AATTTTCACA ATTCTTACTT GCTGGATAGC TTGGTCAATT ATTGGAGGCT TCTTTGGAGG TATTCGAGTT ACAGAGGAAG AGGAGCTCAA AGGCCTTGAT ATTGGTGAGC ATGGAATGGA AGCATATCCA GACTTTGCTT CAGCTCAATA A
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Protein sequence | MTSALQTPSS RRVERLQEAS LLRGPMLLLK SIRGFNSRSS LIWLACVPLA LFGLGLFNLS AHAGDFALTT QALADNLWIM VAAVLVIFMN AGFAMVEAGM CRQKNAVNIL AKNLIVFTLA VSAYWFIGYK LMYTGSWVIP GVLKLGTPFF NPAPTDPAGL VPSIDFLFQA AFAGTAATIV SGVVAERIKF GEFVVFSLVL TAVIYPIAGS WQWNGDGWLA QLGFYDFAGS SIVHSVGAWA GLIGAIALGP RIGKFVDGRS QALPGHNMAI ATLGALILWI GWYGFNGGSV LAFNEAVPYV AVTTTLGAAG GGIAATLLSQ LNTGKPDLTM TINGILAGLV SVTAGADGLS LWSSWLVGAI GGLLVVWSVA FVDGLQIDDP VGAVSVHGTC GVWGTLAVGL FYGGKGVFAG GTLSQLLIQA VGAASYAIFT ILTCWIAWSI IGGFFGGIRV TEEEELKGLD IGEHGMEAYP DFASAQ
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