Gene P9211_02121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_02121 
SymbolrbgA 
ID5730452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp204156 
End bp205019 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content41% 
IMG OID641284556 
Productribosomal biogenesis GTPase 
Protein accessionYP_001550097 
Protein GI159902753 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID[TIGR03596] ribosome biogenesis GTP-binding protein YlqF 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCC CTCTTATTCA ATGGTATCCA GGCCACATTG CTAAGGCAGA AAAGCAGCTA 
AAGAAGCATA TCGATAAAGT AGATCTCGTA ATAGAAGTAC GAGATGCTCG TATACCAATA
TCAACTTCAC ATCCTCATCT TGAAAAATGG ATCACCAATA AAAAGCATTT ATTAGTGATT
AATCGTAGAG ACATGATTAC AAATAAAGCT ATTAAAGAAT GGGATCAGTG GTTTAAGTCT
GAAGGGAAAA CTCCATGGTG GTGTAATGCC AAAAATGGAA ATGGCGTAGC CATGATCAAA
GAAGCAGCTA TTAGACTAGG GGATGAATTG AACGAGCGCC GTAAATCAAG AGGAATGAGA
AGTCGTGCAG TAAGAGCTCT TACACTGGGC TTCCCAAATG TTGGCAAATC TGCTCTAATC
AATAGGCTAA CCATGCAAAA AGTTGTTGAG AGTTCGCGTC GAGCAGGAGT AACAAAATCT
CTTCGTTGGG TCAGGCTTGG TCAACAGCTT GATCTATTAG ATGCTCCTGG TGTATTGCCA
CCACGATTAG AGAACCAAAA AGCTGCACTG CTACTTGCTA TATGCGATGA CATTGGTCAA
GCAGCGTATG ATGTTGAATC GGTAGGGATA GCCTTTTTAA GGCTCCTAAG TGCTCTTGAA
GAAACATATT CTGGTTTCAA CAAAGAATCT CTTAAGGAAC GCTATGGAAT TGCTCTAGAA
AACTGTGAGC CCAATGTCCA TGACTGGTTG GCTAATTCAG CGAGTGTACA CACTTCAGAC
GACTTGAGAA GAATGGCACA GAAATTATTA GATGACTTCC GCAAATTATT ACTTGGCCAA
ATTTCTCTTG AACTTCCTAA ATAA
 
Protein sequence
MISPLIQWYP GHIAKAEKQL KKHIDKVDLV IEVRDARIPI STSHPHLEKW ITNKKHLLVI 
NRRDMITNKA IKEWDQWFKS EGKTPWWCNA KNGNGVAMIK EAAIRLGDEL NERRKSRGMR
SRAVRALTLG FPNVGKSALI NRLTMQKVVE SSRRAGVTKS LRWVRLGQQL DLLDAPGVLP
PRLENQKAAL LLAICDDIGQ AAYDVESVGI AFLRLLSALE ETYSGFNKES LKERYGIALE
NCEPNVHDWL ANSASVHTSD DLRRMAQKLL DDFRKLLLGQ ISLELPK