| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_02111 |
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| Symbol | rluD |
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| ID | 5731177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 203173 |
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| End bp | 204156 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641284555 |
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| Product | putative pseudouridylate synthase specific to ribosomal large subunit |
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| Protein accession | YP_001550096 |
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| Protein GI | 159902752 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATA GTACTAAGCA ATGCTTTGGC GAAGGAGAAG GAGAACTAGT AATCCTCCAT
TATCCCAAGC CACTTCCAAT GAGACTTGAT CGCTGGCTAG TGAGTCAAAG GTCAGAACAA
AGTCGTGCAC GTATTCAGAA ATTTATTAAT GAAGGATTAG TCAAAGTGAA TGAAAAAATA
GGTAAGGCAA AAACACCTCT TAGGCAAGGA GACGAAATTA AACTATGGCT ACCACCACCC
GAGCCACTCC CATATCTGAA ACCAGAAAAA ATTAGCTTGG ACATATTATA TGAAGACAAA
TATTTAATCG TAATAAATAA GCAAGCAGGC ATAGCCGTCC ATCCTGCACC AGGAAATAAA
TTCGGTACGT TAGTCAATGG CTTACTCCAT CATTGCAATG ATCTCCCAGG AATTAGTGGA
AAACTTAGGC CAGGAATTGT ACATCGTCTA GATAAAGACA CAACAGGCTG CATTGTGGTT
GCAAAGACAC AAGAAGCATT AGTGAATCTA CAGAAACAAA TTCAGACACG AGTCGCATCT
AGGATTTACC TTGCTATTGT TCATGGCGTA CCCAAGGGAG ACAAGGGGAC AATCATTGGA
GCAATAGGAC GGCATCCAGT CGATCGAAAA AAATACGCCG TTGTAACCAA TGAGATGGCC
AGATATGCTT GTACTCATTG GGAGCTTAAA GAAAGACTTG GCGATTACTC ACTCCTAAGC
TTCAAATTAG ATACAGGGAG AACTCATCAA ATCCGTGTAC ATTGTGCCCA TTTTGGTCAC
CCCATCCTTG GAGACCAAAC ATATAGTCGC TGCAAAAAAT TGCCTAATGG AGTCTCCAGT
CAAGTTTTAC ATGCTGTTAA ACTTGGTCTA AAGCATCCAC ATAACAATGA AACAATGCTT
TTTGAAGCAC CATTGCCCAA TACATTTAAA AATGTTTTGA CTCGATTACA AAAGAGACTA
ATTACTAATG ACAATAATTC ATAG
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| Protein sequence | MEDSTKQCFG EGEGELVILH YPKPLPMRLD RWLVSQRSEQ SRARIQKFIN EGLVKVNEKI
GKAKTPLRQG DEIKLWLPPP EPLPYLKPEK ISLDILYEDK YLIVINKQAG IAVHPAPGNK
FGTLVNGLLH HCNDLPGISG KLRPGIVHRL DKDTTGCIVV AKTQEALVNL QKQIQTRVAS
RIYLAIVHGV PKGDKGTIIG AIGRHPVDRK KYAVVTNEMA RYACTHWELK ERLGDYSLLS
FKLDTGRTHQ IRVHCAHFGH PILGDQTYSR CKKLPNGVSS QVLHAVKLGL KHPHNNETML
FEAPLPNTFK NVLTRLQKRL ITNDNNS
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