| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_02071 |
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| Symbol | trmE |
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| ID | 5731363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | - |
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| Start bp | 197029 |
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| End bp | 198396 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641284551 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001550092 |
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| Protein GI | 159902748 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.828373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGG CTTTCTCAAC AGAAGAAACA ATCGCAGCGA TTGCTTCGGC AGTGTCACCA
GGGCAGGGAG GAGTGGCGGT AATTCGCATT TCAGGACGAT CTGCTCAAGA AACTTGCAAA
CAAATTGTCC ACATCCCTGG TGATCAAATT TGGAGTAGTC ACAGAATTGT TTATGGGCAT
GTAATAGAGA AGAAAACTCA AAAGCATATA GACGAAGTAT TGATATTAAT TATGGAGGCT
CCGAGAAGCT TCACTGGGGA AGATGTAGTA GAGATTCACT GTCATGGAGG ATTGATCTCA
GTTCAAAGAA TACTCAACCA AATCCTTGAA CAACCAGACG TTAGGAGAGC CTTGCCTGGG
GAGTTTAGCC AGCGTGCAGT ATTGAATGGA CGGCTTGATC TTATACAAGC AGAAGCAATT
AATGATTTAA TTAGCGCCAA AAGTCAAAAG GCCGCTGAAC TTGCCATGGC AGGTGTTGAT
GGCGATATAA CTCAGAGAAT TAATTCACTA CGAGATAAGC TCTTAGATCA ACTCAGTGAA
ATAGAAGCTC GCATTGACTT TGAAGATGAC CTCCCCCCCC TTAATAAGCA AGCATTGTTG
GCTGATCTAA TTAAAATAAA TAACGAGCTG CAGCAACTAG TAATTGATGC AAAGCAAGGA
TGTATTTTTC GTAATGGGTT AAAAATTGCC CTAATTGGAC TGCCAAATGT TGGGAAAAGT
TCAGTTCTTA ATCGTCTTAG TAAACGTGAA AGAGCAATTG TGACTGCTTT ACCAGGCACA
ACGAGGGATC TACTAGAAAG TGAAATTATT TTAGAAGGAA TCCCTATTAC GCTTCTTGAT
ACTGCTGGCA TACGCTCTAC AAATGATGAG GTAGAAAAAA TTGGTGTAGC CAAAAGCAAG
AATGCATTAA TGACAGCCGA TATTGTGCTA TTTATTTTTG ATATGAGCAT TGGCTGGACA
ACAGCTGACC AAGATCTATT TGATCAAATT CCCAAACAAA TGCCCACACT ACTTATAGGC
AATAAAGCTG ATATAAAAGT CCAGCAAGAT ACCAATCAAG CAGAAATCAT CTTTAGTGCT
TTAACTGGTC AAGGAGAAAA TAATTTAATA CAAGCCCTAT TAAAGATATG TGGGCTACAC
GAAACTCACG GAATTGAAAT CGCTCTGAAT GAACGACAGC TTGACCTTGT AAATGCTGCC
TCTAAAGCTT TGGGAAAAAC TCTGGAAGTG ACAACTCAAG AATTACCATG GGATTTTTGG
ACTATTGATT TACGCGATGC AATTCAAAAA TTAGGAGAAC TAACAGGTCA TGAAATTTCT
GAGGCTCTTC TAGATAGGAT CTTCTCACGC TTTTGTATAG GTAAATAA
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| Protein sequence | MNLAFSTEET IAAIASAVSP GQGGVAVIRI SGRSAQETCK QIVHIPGDQI WSSHRIVYGH
VIEKKTQKHI DEVLILIMEA PRSFTGEDVV EIHCHGGLIS VQRILNQILE QPDVRRALPG
EFSQRAVLNG RLDLIQAEAI NDLISAKSQK AAELAMAGVD GDITQRINSL RDKLLDQLSE
IEARIDFEDD LPPLNKQALL ADLIKINNEL QQLVIDAKQG CIFRNGLKIA LIGLPNVGKS
SVLNRLSKRE RAIVTALPGT TRDLLESEII LEGIPITLLD TAGIRSTNDE VEKIGVAKSK
NALMTADIVL FIFDMSIGWT TADQDLFDQI PKQMPTLLIG NKADIKVQQD TNQAEIIFSA
LTGQGENNLI QALLKICGLH ETHGIEIALN ERQLDLVNAA SKALGKTLEV TTQELPWDFW
TIDLRDAIQK LGELTGHEIS EALLDRIFSR FCIGK
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