| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_01951 |
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| Symbol | menF |
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| ID | 5730902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9211 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009976 |
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| Strand | + |
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| Start bp | 186855 |
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| End bp | 188252 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641284539 |
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| Product | isochorismate synthase |
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| Protein accession | YP_001550080 |
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| Protein GI | 159902736 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.109371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATGTG GCCCAACTTT TAGTGAATTT TTGCAAGCGT CTTTACGAGC TTGGGCTTTA
AGGCGAATTG AAGACTGTGT TTTGAGCCTG GCCTTGCCTT TAGAAAGTGT TGACCCGTTA
ACTCAATTAC CTGTAATTGC TGATAGGCAC CATTTTAGTT TCCTTTGGGA TAGTTCTCCA
GGATTAACTC TTGCAGCTGC GGGCAAATGT CAGAATTTTG AATTAGTTGG TCAAAGAAGA
TTTGAATTAG CTCAAAGATT CAGTGATGAG ACACTTAATA GGCTTATAGA TGGAACTCCA
GAGGCACCAA GCCATGCAAA ACCTAGAGTC TTGCTTGCCT TTACATTTTT TGAACAAACC
ACTGAAATTA AAATTGGTAC AAAAAACATT CCTGCTGTTC AAGCTATTTT GCCTTCTTGG
CAATTAACCC GTCAGACCGG TCAAAGTTGG TTGCGTTTGA ACGCTGTTGT TGCTCATGAA
GCAGATGTTA GGGATTTTGT CGAACAGCTT TGGTTAATGC GTGAAAAACT GGTTACAAGT
TCTAAGCAGG TCTGGCTTAC ATCGATCAAT ATGTTGGGGG TTTCAATATC TCAAAATTGG
CAAAACAATT ATCGGCTAGC TCTCGCAAAG GGTATTGATT TGGTTAATTC TGGTGAACTT
AAAAAATTAG TTCTTGCTGT CAAAGAGTCA ATTGTACTTA AAGAACCATT AAACCCTCTC
GTTGTTTTGT CTAATCTTCG CATTCGTCAA CAAGGAAGTT GTCGCTTCTT ATGGAAGAGA
GCTAGTGATG AGTCTTTCTT TGGAGCTTCT CCAGAACGTC TACTAAGTTG TAGGAACGGC
CTAATTAGAA CTGATGCACT TGCTGGAACT GCTAGTAAAG ATGATGATGG CTACGATTTA
CTTCGTTCAG ATAAGGACCT GCGAGAACAT GAACTAGTTG TTAGTTCGAT TCATAATCAA
ATGATTCAAC AAGGGTTAGA ACCGTATAGA TCAAGGAGTC CACGTTTGGC TAAGCATGGC
CATTTAGTTC ACTTACATAC ACCAATTACT GCAATGAATA AAGGTCTTTC GCCGCTTCAA
CTTGCAGATG CTTTGCATCC AACACCAGCA GTCGCTGGAC TACCAAGGCC TAAGGCCTTT
AAGTGGTTGA GAACACTTGA ATCTTTTGAT CGAGGGAATT ATGCCGCCCC TATAGGATGG
ATAGATAATC TTGGCAATGC AGAGTTTAGA GTCGCTATTC GATGTGCTTA TGCTAGAGGT
ACAAGTCTCG AATTAATAGC TGGAGCAGGA CTTGTAAAGG GATCAGTAGT AGAAAAAGAG
TTGCAAGAAG TTAAGTTGAA ACTTGGTGTT ATGGCTGATC ATGTTTCATC TGAATCATTA
ACTAAACTTG TCAAGTAA
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| Protein sequence | MKCGPTFSEF LQASLRAWAL RRIEDCVLSL ALPLESVDPL TQLPVIADRH HFSFLWDSSP
GLTLAAAGKC QNFELVGQRR FELAQRFSDE TLNRLIDGTP EAPSHAKPRV LLAFTFFEQT
TEIKIGTKNI PAVQAILPSW QLTRQTGQSW LRLNAVVAHE ADVRDFVEQL WLMREKLVTS
SKQVWLTSIN MLGVSISQNW QNNYRLALAK GIDLVNSGEL KKLVLAVKES IVLKEPLNPL
VVLSNLRIRQ QGSCRFLWKR ASDESFFGAS PERLLSCRNG LIRTDALAGT ASKDDDGYDL
LRSDKDLREH ELVVSSIHNQ MIQQGLEPYR SRSPRLAKHG HLVHLHTPIT AMNKGLSPLQ
LADALHPTPA VAGLPRPKAF KWLRTLESFD RGNYAAPIGW IDNLGNAEFR VAIRCAYARG
TSLELIAGAG LVKGSVVEKE LQEVKLKLGV MADHVSSESL TKLVK
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