Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_01641 |
Symbol | ndhF |
ID | 5730780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 158370 |
End bp | 160373 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641284508 |
Product | NAD(P)H-quinone oxidoreductase subunit F |
Protein accession | YP_001550049 |
Protein GI | 159902705 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.124159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATCGG CCGCTGAAAT CGCATGGTTA ATACCTTTGC TCCCTCTCAT CGGGGCGGTG TTATCAGGAT TGGGATTAAT TAGTTTCAAC CGAGAAACCA ATCGGTTGAG AAAGCCTGTC GCAATAAGTT TGTTGACATG TGTAGGGGCT TCAGCTGTAT TGAGTTATGC AGTTCTTTTA GAACAAGTTT CTGGGGCCCC TCCAGTAGAG CATCTTTTTA TATGGGCTAG TGCTGGAGAC TTCAGTTTGC CAATGGGGTA TGTAGTCGAC CCTTTGGCTG CGGTAATGCT GTCTTTGGTT ACCACAATTG CCCTTTTGGT AATGATTTAT TCCCATGGGT ATATGGCTCA TGACAAAGGA TATGTGAGAT TTTTCACCTA TTTGGCATTA TTTAGTAGCT CAATGCTGGG CTTAATAATT AGTCCAAACT TGCTTGAAAT ATATGTTTTT TGGGAATTAG TTGGAATGTG CTCATATCTT TTAGTTGGGT TCTGGTATGA CAGAGATGGT GCAGCTCATG CGGCTCAAAA AGCTTTTGTT GTAAATAGAG TTGGTGATTT TGGACTTTTA CTTGGGATTC TTGGACTGTT TTGGGCTACG GGAAGTTTTG ATTTTGATGG GATAGCTACA GGTCTGGCTG ATGCAACTGC TTCTGGCAAT GTACCTGTAT GGGCGGCCTT ATTGCTTTGT TTCTTAGTCT TTATGGGCCC TATGGCTAAA TCTGCTCAAT TTCCATTGCA TGTTTGGTTG CCAGATGCCA TGGAAGGGCC AACACCTATC TCAGCATTAA TTCATGCCGC GACCATGGTT GCAGCTGGGG TGTTTCTTGT CGCGAGACTT GAGCCTCTGT ATAGCCAATT CCCTTTTATT GGACTATTAA TAGCCATTTT TGGAACAATT ACATGCTTTT TAGGGGCTTC AATTGCTTTG ACCCAGATGG ATTTAAAGAA GGGTTTAGCG TATAGCACTG TTTCTCAGCT TGGTTACATG ATGCTTGCAA TGGGTTGTGG TGCGCCCATT GCGGGGATGT TCCATTTGGT CACGCATGCT TTCTTTAAGG CAATGCTTTT CTTGGGATCA GGTTCGGTGA TTCATGCAAT GGAAGAAGTA GTAGGGCATG AACCGATTCT TGCTCAAGAT ATGAGACTAA TGGGTGGTTT ACGCAAAAAG ATGCCTATTA CTTCAATGAC TTTTTTGATT GGATGTGTTG CGATTAGTGG AATTCCTCCT TTGGCTGGTT TCTGGAGTAA AGATGAAATA CTTGGAGAGG CGTTTAATAC ATTCCCAATC CTTTGGGGAA TTGGCTTCCT AACTGCTGGG ATGACAGCCT TTTATATGTT TAGGCTGTAT TTCCTTACAT TTGAGGGTAG CTTTAGGGGA GATAATGTAG AGCTTCAAGA GGAGTTATTA GTTCTTGCAG GAAAAGATAA TGAAGAGCAA GAAGATCATC ATTCTGGTTC AATTCACGAA TCCGCTTGGC CAATGACAGT GCCATTAGTT GTTTTAGCTG TGCCTTCTGT GATTATTGGC TTTTTAGGTA CTCCATGGAA TAGCAGTTTT GCAAAATTAC TTGATCCAAC AGAGGCAATT GAGATGGCAA CTAATTTTAG TTGGGGGGAA TTCCTTCCTC TAGCCTTAGG GTCTGTTGCC ATTTCAATCG CTGGGATTTC CTTGGCAGTT TTTGCTTATT TCTTGAAGCG AATCGATTTA GCTACAAACA TTGCACAGAG ATACCCAGCA ATTAATGCTT TTTTATCGAA CAAGTGGTAT TTAGATGATA TTAATGAAAG GATTTTTGTT CGTGGGAGCA GAAAATTAGC TCGTGAAGTT TTAGAGGTGG ATGCCAAGGT TGTTGATGGA GTTGTTAATT TAACTGGGCT TTTAACTTTA GGAAGCGGAG AAGGATTGAA ATATTTTGAG ACTGGCAGAG CACAGTTTTA TGCACTCATT GTCTTTGGAG GAGTAATAGC ACTAGTAGCT CTTTTTGGAG TATTGGGTAC TTAA
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Protein sequence | MLSAAEIAWL IPLLPLIGAV LSGLGLISFN RETNRLRKPV AISLLTCVGA SAVLSYAVLL EQVSGAPPVE HLFIWASAGD FSLPMGYVVD PLAAVMLSLV TTIALLVMIY SHGYMAHDKG YVRFFTYLAL FSSSMLGLII SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AAHAAQKAFV VNRVGDFGLL LGILGLFWAT GSFDFDGIAT GLADATASGN VPVWAALLLC FLVFMGPMAK SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGVFLVARL EPLYSQFPFI GLLIAIFGTI TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPI AGMFHLVTHA FFKAMLFLGS GSVIHAMEEV VGHEPILAQD MRLMGGLRKK MPITSMTFLI GCVAISGIPP LAGFWSKDEI LGEAFNTFPI LWGIGFLTAG MTAFYMFRLY FLTFEGSFRG DNVELQEELL VLAGKDNEEQ EDHHSGSIHE SAWPMTVPLV VLAVPSVIIG FLGTPWNSSF AKLLDPTEAI EMATNFSWGE FLPLALGSVA ISIAGISLAV FAYFLKRIDL ATNIAQRYPA INAFLSNKWY LDDINERIFV RGSRKLAREV LEVDAKVVDG VVNLTGLLTL GSGEGLKYFE TGRAQFYALI VFGGVIALVA LFGVLGT
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