Gene P9211_01621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_01621 
SymbolrbcR 
ID5731792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp156536 
End bp157504 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content38% 
IMG OID641284506 
Productputative Rubisco transcriptional regulator 
Protein accessionYP_001550047 
Protein GI159902703 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC TGCCTTTCAC TCTTGATCAG CTCAGAATCC TTCAAGCAAT AGTTAAGGAA 
GGGAGCTTTA AAAAAGCTGC AGAAACCCTT TATGTAACCC AGCCTGCAGT AAGCCTTCAA
ATTCAAAATC TTGAAAAACA ATTAGAAATT GCAATTTTTG ATAGAGGGGG AAGAAAAGCT
CAATTAACAG AGGCTGGAAA ACTTTTACTG AAATATTGTG AAAAAATCCT GAATCAGTGT
GATGAAGCTT GTGGTGCGAT TGAAGATTTA CACAACCTCA AAGGGGGCTC ATTAATAATC
GGAGCAAGCC AAACAACAGG AACATATTTA ATGCCTCGAA TGATTGGACT TTTCAGGCAA
AAGTTCCCGG ACGTATCAGT GGTGCTTCAA GTTCATAGCA CTCGAAGAAC AGGCTGGAGT
GTTGCCAATG GTCAAATTGA TTTAGCAATA ATTGGGGGAC AACTGCCGGC AGAGCTACAT
GAATTACTTG AGATAATTCC TTACGCAACA GATGAATTGG CATTAGTACT TCCTGTTAAA
CATCCATTAG CAAGACACCA CGAACTAACA AAAGAAGATT TATATCGTCT CAGTTTTGTT
ACTTTAGACT CTCAATCAAC TACAAGAAAA GTTGTTGACC AACTCCTAAA AACTTCTGGA
TTAGATATTC AGAGATTACG AATTGAGATG GAGCTCAATT CATTAGAAGC AATTAAAAAT
GCTGTGCAAT CTGGCTTAGG AGCAGCATTT CTTCCGGTAG TTTCAATAGA ACGAGAATTA
GCAGCTGGGA CTGTTCACAA ACCTAATATT GCAGACCTAG AAGTAAAAAG AGAATTAAAA
TTAATTAGCA ACCCTAGCAG GTATACATCA AGAGCATCAG AAGCATTTAC AAAAGATATT
TTGCCTGTTT TTGCAAGTTG GGATAGTCCT CTTAGAAATA AAGAAGCTGG TGTTAAGAAG
AAACTTTAA
 
Protein sequence
MAELPFTLDQ LRILQAIVKE GSFKKAAETL YVTQPAVSLQ IQNLEKQLEI AIFDRGGRKA 
QLTEAGKLLL KYCEKILNQC DEACGAIEDL HNLKGGSLII GASQTTGTYL MPRMIGLFRQ
KFPDVSVVLQ VHSTRRTGWS VANGQIDLAI IGGQLPAELH ELLEIIPYAT DELALVLPVK
HPLARHHELT KEDLYRLSFV TLDSQSTTRK VVDQLLKTSG LDIQRLRIEM ELNSLEAIKN
AVQSGLGAAF LPVVSIEREL AAGTVHKPNI ADLEVKRELK LISNPSRYTS RASEAFTKDI
LPVFASWDSP LRNKEAGVKK KL