Gene P9211_00221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_00221 
SymbolmurC 
ID5730845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp23188 
End bp24618 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content34% 
IMG OID641284364 
ProductUDP-N-acetylmuramate-alanine ligase 
Protein accessionYP_001549907 
Protein GI159902563 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.05611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0698138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCATA TCCATTTCAT AGGTATTGGA GGTATTGGGA TGTCCGCAAT AGCGCTGATC 
TTGGTTAAGC GCGGCTACTC CATATCAGGT TCAGACCAAA AAAGTAATAA TGCAATGGCA
GAGTTAAGTA ATCATGGAGT TCAAACATTT ACCAATCAAA GTGCGAAAAA TATTCAAATA
ATATGTAAAA ATATGGAGAC TAAACCAATC ATAATAATTA GTTCTGCCAT ATTCAAAGCA
AATCCAGAAT TGCAAGAAGC TTATAGACAA AAATTAAAAG TCTTTCATCG TTCTGATATT
CTCGCTTGGC TGATTAAACA ACAGCCATCA ATTGTAGTGG CTGGAAGTCA TGGCAAAACA
ACTACAAGCA CAATAATTAC AACTCTTTTG GCATTAAATA AAGAAGACCC CACGGCGCTT
ATTGGCGGAG TTGTTCCCTT CTACAAAAGC AATGGACATG CAGGAAAGGG TAAATTTCTT
GTTGCAGAAG CAGATGAATC TGATGGAACA CTAGTAAAGT TTGAAGGAGA TATAGGTATA
ATCACTAATA TTGAATTAGA TCACACAGAT TACTATAAAG ATCTTGAATC TTTGAAAGAA
ACTATGGAAA AATTTAGCAA AAGCTGCAAA AAAGTTTTGG CCAACCATGA TTGTCCTAAT
CTTCAAAATA AGTCAAATAA AAATATCAAT TGGTGGTCTA CACAAACGAT AAAAGGTGTT
GATTTCTCAG GCATACCAAC TTCCATAAAT GGCAATGAAA CAACTGCTGA TTTCTACGAA
AAAGAAACTT TTTTAGGTGA AATAACAGTT CCATTACCTG GATTACATAA TCTTAGCAAT
GCGGTTGGCG CAATAGCAGC ATGCAGGCTT GCAGGCTTAT CATTTTCTGA ATTAAAAAAT
AGTCTCAAAG ATATTAAACC TCCTAATAGA AGATTTGATT TTAAAGGTCA ATGGCAAGGC
AGGCAAATTG TTGATGATTA TGCGCATCAT CCTAGTGAAA TAAATGCAAC AATTGAAACC
GCTAGGCTAA TGATCAATAC AAAAACCAAT TGGCTACCTA AAATATCAAA AAGATTAGTA
GTTGTTTTTC AACCTCATCG TTATACTCGG ACTAAGCATT TAATAAAAGA TTTTGCAAAA
TCTCTTGGAA AAGCTGATAT TGTTTTTCTC GCACCCATCT ATAGTGCTGG AGAAGAGATG
ATTAGTGATG TCAGTATTAA CTCCCTTTTT TCATTAATAA AAAAAGAGCA TCCGAACATC
AGTATTTATA CTTCTACTAA CATGAAAGAA CTCGAAAGTA TCATTAAAAA AAACACCATA
AAAGATGATC TCATTCTATT TATGGGGGCA GGTAATATTA ATATGTTGTC TAAAAAATTA
CTAGAGAAGT CAAAAACTAA TAAAAACCAG TCTAAACATC TAGTAGCCTA A
 
Protein sequence
MRHIHFIGIG GIGMSAIALI LVKRGYSISG SDQKSNNAMA ELSNHGVQTF TNQSAKNIQI 
ICKNMETKPI IIISSAIFKA NPELQEAYRQ KLKVFHRSDI LAWLIKQQPS IVVAGSHGKT
TTSTIITTLL ALNKEDPTAL IGGVVPFYKS NGHAGKGKFL VAEADESDGT LVKFEGDIGI
ITNIELDHTD YYKDLESLKE TMEKFSKSCK KVLANHDCPN LQNKSNKNIN WWSTQTIKGV
DFSGIPTSIN GNETTADFYE KETFLGEITV PLPGLHNLSN AVGAIAACRL AGLSFSELKN
SLKDIKPPNR RFDFKGQWQG RQIVDDYAHH PSEINATIET ARLMINTKTN WLPKISKRLV
VVFQPHRYTR TKHLIKDFAK SLGKADIVFL APIYSAGEEM ISDVSINSLF SLIKKEHPNI
SIYTSTNMKE LESIIKKNTI KDDLILFMGA GNINMLSKKL LEKSKTNKNQ SKHLVA