Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9211_00161 |
Symbol | grpE |
ID | 5730843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9211 |
Kingdom | Bacteria |
Replicon accession | NC_009976 |
Strand | + |
Start bp | 18859 |
End bp | 19602 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641284358 |
Product | heat shock protein GrpE |
Protein accession | YP_001549901 |
Protein GI | 159902557 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0174287 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACG AAGCCTCTAC TCCAATCCAG GAAGATCTAA AAGAAGAATC TGCTGTTGAT TTAGCTCAGG AGGCAAAGCC TACTAGTGAT GAACCTTCAC TATCAAACGT CGCAGAAGGT TCTCAAGAAG CTGGGGCAGA GACAGACGTG ACTTCTTCAG ATGCAAAGGA TTCCTCTTCT CAAGCACTTG ATAATGAAGC GCGACTTGAA CAACTTGAAA GGGAACATGA AACATTAAAC AGTCAATATA TGAGAATTGC AGCGGATTTT GATAATTTTC GAAAACGACA AAGTCGAGAT CAAGACGACC TTCGCTTACA ACTTCAATGT AATACTTTGA GCAGTATTTT GCCTGTTGTA GACAACTTTG ATCGAGCCAG GCAGCAATTA AATCCTGAGG GAGAAGAGGC ACAAGCTCTA CACAAAAGCT ATCAAGGTCT TTATAAGCAA CTGGTAGATG TTTTAAAACA GCTTGGAGTG GCCCCTATGC GTGTAGTAGG ACAAACTTTT GATCCAAGTT TGCATGAAGC AGTTCTTAGA GAGCCAAGTG ATGAATTGGC AGAAGATATT ATTGTGGAAG AATTGCAGCG TGGCTATCAC TTAAATGGTC GTGTTTTAAG GCATGCCTTA GTTAAGGTTT CTATGGGCCC TGGTCCAAAA GATGATGGTG AAGAAACTAT TACGGAACAA TCCTTGGAAG GGGACAATAC TACTGATCAA CAATCTTCAG AAAAATCGGA TTGA
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Protein sequence | MNDEASTPIQ EDLKEESAVD LAQEAKPTSD EPSLSNVAEG SQEAGAETDV TSSDAKDSSS QALDNEARLE QLEREHETLN SQYMRIAADF DNFRKRQSRD QDDLRLQLQC NTLSSILPVV DNFDRARQQL NPEGEEAQAL HKSYQGLYKQ LVDVLKQLGV APMRVVGQTF DPSLHEAVLR EPSDELAEDI IVEELQRGYH LNGRVLRHAL VKVSMGPGPK DDGEETITEQ SLEGDNTTDQ QSSEKSD
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