Gene P9211_00161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_00161 
SymbolgrpE 
ID5730843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp18859 
End bp19602 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content41% 
IMG OID641284358 
Productheat shock protein GrpE 
Protein accessionYP_001549901 
Protein GI159902557 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0174287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACG AAGCCTCTAC TCCAATCCAG GAAGATCTAA AAGAAGAATC TGCTGTTGAT 
TTAGCTCAGG AGGCAAAGCC TACTAGTGAT GAACCTTCAC TATCAAACGT CGCAGAAGGT
TCTCAAGAAG CTGGGGCAGA GACAGACGTG ACTTCTTCAG ATGCAAAGGA TTCCTCTTCT
CAAGCACTTG ATAATGAAGC GCGACTTGAA CAACTTGAAA GGGAACATGA AACATTAAAC
AGTCAATATA TGAGAATTGC AGCGGATTTT GATAATTTTC GAAAACGACA AAGTCGAGAT
CAAGACGACC TTCGCTTACA ACTTCAATGT AATACTTTGA GCAGTATTTT GCCTGTTGTA
GACAACTTTG ATCGAGCCAG GCAGCAATTA AATCCTGAGG GAGAAGAGGC ACAAGCTCTA
CACAAAAGCT ATCAAGGTCT TTATAAGCAA CTGGTAGATG TTTTAAAACA GCTTGGAGTG
GCCCCTATGC GTGTAGTAGG ACAAACTTTT GATCCAAGTT TGCATGAAGC AGTTCTTAGA
GAGCCAAGTG ATGAATTGGC AGAAGATATT ATTGTGGAAG AATTGCAGCG TGGCTATCAC
TTAAATGGTC GTGTTTTAAG GCATGCCTTA GTTAAGGTTT CTATGGGCCC TGGTCCAAAA
GATGATGGTG AAGAAACTAT TACGGAACAA TCCTTGGAAG GGGACAATAC TACTGATCAA
CAATCTTCAG AAAAATCGGA TTGA
 
Protein sequence
MNDEASTPIQ EDLKEESAVD LAQEAKPTSD EPSLSNVAEG SQEAGAETDV TSSDAKDSSS 
QALDNEARLE QLEREHETLN SQYMRIAADF DNFRKRQSRD QDDLRLQLQC NTLSSILPVV
DNFDRARQQL NPEGEEAQAL HKSYQGLYKQ LVDVLKQLGV APMRVVGQTF DPSLHEAVLR
EPSDELAEDI IVEELQRGYH LNGRVLRHAL VKVSMGPGPK DDGEETITEQ SLEGDNTTDQ
QSSEKSD