Gene P9211_00081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9211_00081 
SymbolnusB 
ID5730007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9211 
KingdomBacteria 
Replicon accessionNC_009976 
Strand
Start bp11415 
End bp12050 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content31% 
IMG OID641284350 
Producttranscription antitermination protein NusB 
Protein accessionYP_001549893 
Protein GI159902549 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000149068 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAATCTC GATCTATTTC TAGAGAAATT GCACTTTTGG TATTAGGTCA GATTTCAGAT 
AAACAAATTA ATAACATAGA AGATATATCA CTCGAAGATT TATTAATGCT TGGCCTTGAA
ACTCTTATGA ATCATTTGAG GGAGCAATTA GATTTCTGTG CTGTTCAGCT TGAATCAGCG
CAAGAGCAAT TACTGGATAG TGAATTGGAA AGCTGTGAGA AAACATCAGC TTCTAAAATT
AGAAATCATT TAGAGACTTC TTTAAATCAC TCACGAGATA TTATAAATAG TTTGTCTGAT
AGCTTAGAAT TAACAACACT CTTGGCTTTA TCTGATCAAG TTAATATTCG GGAAGATGCA
ATTCAAAGGG TAAGTTTAGT TTTGCAAAAT TTACAGAGTA TTAATTTAAA TCTAGATGAA
GTTATGGATG GATGGCGATT AAAACGTTTG CCAAGAATTG ATCAGGATAT TCTCAGACTT
GCATATATAG ACATACATAT ATTAAATGCT CCAATTGCTG TTGCTTGTAA TGAAGCTGTA
AATCTTGGTA ATAAATATAG TGATAAACAA GGAAGGCGAA TGATTAATGG TATTTTAAGG
AGACTACAAA ATTCTGATTC AATTAATATT GCCTAA
 
Protein sequence
MQSRSISREI ALLVLGQISD KQINNIEDIS LEDLLMLGLE TLMNHLREQL DFCAVQLESA 
QEQLLDSELE SCEKTSASKI RNHLETSLNH SRDIINSLSD SLELTTLLAL SDQVNIREDA
IQRVSLVLQN LQSINLNLDE VMDGWRLKRL PRIDQDILRL AYIDIHILNA PIAVACNEAV
NLGNKYSDKQ GRRMINGILR RLQNSDSINI A