Gene MmarC6_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1820 
Symbol 
ID5737362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand+ 
Start bp1708243 
End bp1708848 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content31% 
IMG OID641284320 
Productribonuclease H 
Protein accessionYP_001549863 
Protein GI159906201 
COG category[R] General function prediction only 
COG ID[COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAA TCTATGCAGT TCGAAAAGGG CGAAAAACTG GACTATTTGA AACATGGGCT 
GAATGTGAGA GTCAAGTCAA AGGATTTTCT GGGGCCGAAT TTAAAAGTTT TACATCTAAA 
AAAGATGCGA AAGATTATTT AAATCAAAAA ACTGGGCAAA AACAAAATAG TGTAAAATCG 
AACGAATTTA AAAAAGATGT AATGTATGCA TGGGTTGATG GAAGCTTTAA TTTAAAAAAT 
AAGGAATATG GGGCAGGTGC TTTAGTAATA TTCAATGGAA TTGAAAAAGA AATTAAAGCT 
AAGGGAAACG ATGAAGATTT ATCAAAAATG AGAAACGTTG CAGGCGAAAT TTTAGCATCA 
GAACTTGCAA TGGACTACGC AGTTTCTAAA AATGTTAAAA ATTTGGTAAT ATATCACGAT 
TATCTTGGAA TTGAAAAGTG GTGTACTGGA GAATGGAAAA CAAACAAAGC AGGAACGATT 
GAATATAAAG AAAAATGTAA AAATTATCTT AAAAGATTAA ATATTGAATT TGTGAAAGTT 
AAGGCGCATT CTGGGGATAA AAATAACGAA ATTGCTGACA AATTGGCAAA AGAGTCGTTA 
ATTTAA
 
Protein sequence
MSKIYAVRKG RKTGLFETWA ECESQVKGFS GAEFKSFTSK KDAKDYLNQK TGQKQNSVKS 
NEFKKDVMYA WVDGSFNLKN KEYGAGALVI FNGIEKEIKA KGNDEDLSKM RNVAGEILAS 
ELAMDYAVSK NVKNLVIYHD YLGIEKWCTG EWKTNKAGTI EYKEKCKNYL KRLNIEFVKV 
KAHSGDKNNE IADKLAKESL I