Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1805 |
Symbol | |
ID | 5737568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1696359 |
End bp | 1696988 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641284305 |
Product | hypothetical protein |
Protein accession | YP_001549848 |
Protein GI | 159906186 |
COG category | [R] General function prediction only |
COG ID | [COG4887] Uncharacterized metal-binding protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.251054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTACT GTGCATTGTG CAATATAAAA GCCTGTAAAT CTGGTGAAGT TGAAAAACTA CCTAAAAAAT GTCCAAATTC TGCTGAAATC ATTGAAAAAT CTAAAGAATT ATATTTACAA GAAGAAAATG GAAAAATTGC ATACAATTCT GCGCTTGTAG AATCAGAAGG TTACTGCAAA CTTACTCGAA TCGAAGAAAC CATTCTGTTT GCGAAAAAAA TGAATTATAA AAAACTTGGA ATTGCATTTT GTACTGGACT TTCAAAAGAA GCTGGAATTT TACATGACAT ATTTTTGAAT CATGATTTTG AAGTTGAATC GGTAATTTGT AAAGCCGGAA GCATTCCTAA AGAATTCATA AAAATAACGG AAAATGAAAA AGTTCATGAA AATCAATTTG AAGCTATGTG TAACCCTATC GGCCAGGCAT TGTTTTTAAA TGAAACAAAA ACAGATTTGA ACATTGTGCT CGGGCTCTGT GTTGGGCATG ATTCATTATT TATAAAATAT TCAAAAGCGC CAGTTACCAT AATTGGTGTT AAAGACAGGA TTTTAGGACA TAACCCTTTA GCTGCCATCT ATACCGCAAA TAGTTATTAT AATGGAAGAT TATTTAAAAA TAAAAAATAA
|
Protein sequence | MYYCALCNIK ACKSGEVEKL PKKCPNSAEI IEKSKELYLQ EENGKIAYNS ALVESEGYCK LTRIEETILF AKKMNYKKLG IAFCTGLSKE AGILHDIFLN HDFEVESVIC KAGSIPKEFI KITENEKVHE NQFEAMCNPI GQALFLNETK TDLNIVLGLC VGHDSLFIKY SKAPVTIIGV KDRILGHNPL AAIYTANSYY NGRLFKNKK
|
| |