| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1798 |
|---|
| Symbol | |
|---|
| ID | 5737725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1689772 |
|---|
| End bp | 1691214 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641284298 |
|---|
| Product | nitrogenase MoFe cofactor biosynthesis protein NifE |
|---|
| Protein accession | YP_001549841 |
|---|
| Protein GI | 159906179 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE
[TIGR01862] nitrogenase component I, alpha chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTGA ACCTTGATAC AGAAAACCGG AAAATGCAAA ATGGAAATAA AAGTGACGAT
TTTGACTTAG AAGTCAAAAT CCCAAACTCC ATTTTTGAAA AGTTAAAATC TATTGAAGCG
TTAAAAGCCA GAGAATCACA AATGTGTGTT TCGGGAAAAG ACGATTCAAT TCCTACATGT
GATAAGAACT CGACCCCTGG AATGATTACC CAGAGATCCT GCGTATATGG GGGAGCAAGA
GTTGTTCTAA TGCCTATAAC TGATGCAGTA CACCTCGTAC ACGGGCCAAT AGGCTGCGCA
GCATGCACAT GGGACATTCG TGGAAGTAAA TCTACAGGAG ATAAACTTTA CAAAAACGGA
TTCTCAACTG ATTTGCAGGA GTCAGATGTT GTATTTGGTG GAGAAAAAAA GCTTTATGAA
TCCATTTTGG AAGTAAATAA GCTTTACCAC CCCGGTGCAA TATTTGTTTA CTCTACATGT
GTAGTGGGCT TGATTGGAGA TGATATCAAA GCAGTTTGTA GGCAGGCAGA AGAAACAACT
TGTTGCAGAG TTATTCCGGT ACAGTCAGAA GGGTTCAAAA GCTTTAACAA AACTGCAGGT
CACAAACTCG CATGTGACGC AATGCTTGAT TACTTAATTG GCACAGAAGA GCCAGAAGAA
GAACACCCGT ACAGTATTAA TATAATTGGA GAATTCAATG TTGCAGGAGA CCTCTGGGGA
ATTATTCCAT TATATGAAAA AATGGGTGTA AAAGTACACA CTGCAATCAC TGGAGACTCA
ACAGTTTCCA AAGTTGCAAG TGCACACAGA TCTAAATTAA ATATAGTACA ATGCCAAAAA
TCATCTAATT ACTTAGCCGC CCAAATGGAA AAGAAATACG GAATACCTAA TCTTAAAGTA
AATTTCTTTG GAATCGACGA AACTACAAAG TCCCTAAGGG CTGTTGCAGA ATTTTTCGGT
GACGAAGAAA TGATTAAAAG AACCGAAGAA CTCATAAAAT CAGAAGTTAA AAATCTTCGA
GATGAAATTT CTGAATACAA AAAAGATCTA GCTGGAAGTA CTGTTGCGAT ATATTCGGGA
GCCCACAAAT CTTGGGCACT GGTAAGCGCA TTTGGTGAAC TCGATATGGA AATTATCATG
AGTGGTACCC AAAACGGAAA ACCAGAAGAT TACCAAAAAA TCAGGGAGCA CGTTTGCGAA
GGTACATTAA TTGTAGACGA TGCAAGTTCA ATGGAACTTG TACAGCTTCT CAAAGAATAC
AAACCTGACA TATTAATTTC TGGAGCCAAA GAAAAATACC TATCCTTGAA AAGTGGAGTT
CCTCACTGTG ATTTCAATCA CGACAGGATA ACTGCATTCT CAGGTTTTCA GGGCTTCATA
AATTTTGCAA GAGTTGTGCA TACCGCAGTT ATGACGCCAG TGTGGAAACT TTCTAGAAAA
TGA
|
|---|
| Protein sequence | MVLNLDTENR KMQNGNKSDD FDLEVKIPNS IFEKLKSIEA LKARESQMCV SGKDDSIPTC
DKNSTPGMIT QRSCVYGGAR VVLMPITDAV HLVHGPIGCA ACTWDIRGSK STGDKLYKNG
FSTDLQESDV VFGGEKKLYE SILEVNKLYH PGAIFVYSTC VVGLIGDDIK AVCRQAEETT
CCRVIPVQSE GFKSFNKTAG HKLACDAMLD YLIGTEEPEE EHPYSINIIG EFNVAGDLWG
IIPLYEKMGV KVHTAITGDS TVSKVASAHR SKLNIVQCQK SSNYLAAQME KKYGIPNLKV
NFFGIDETTK SLRAVAEFFG DEEMIKRTEE LIKSEVKNLR DEISEYKKDL AGSTVAIYSG
AHKSWALVSA FGELDMEIIM SGTQNGKPED YQKIREHVCE GTLIVDDASS MELVQLLKEY
KPDILISGAK EKYLSLKSGV PHCDFNHDRI TAFSGFQGFI NFARVVHTAV MTPVWKLSRK
|
|---|
| |