Gene MmarC6_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1776 
Symbol 
ID5737692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1664596 
End bp1666140 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content35% 
IMG OID641284276 
Productseryl-tRNA synthetase 
Protein accessionYP_001549819 
Protein GI159906157 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00415] seryl-tRNA synthetase, Methanococcus jannaschii family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTA AACTCGATGG GAGAATAATA TTCAGTAAGG ATGTCGAAGA AGAAACACAA 
AAAGATATCG TCGAAGTTTT GGAAAACGGA GATATTTTCT TAAAAGGTGT TCCAGAAGGC
AAAGAAAACG AAGCTTCAAA AATTGAAACT TACGAATTTG ACGGAAAAGA CTTAAAACTT
AAAATGACCT CAGGAACTTA CACGAGAGCA CATGAAGGTA TTGTGAGATT AAAAAAACCA
ATAATGGAAA AAGTTGGAAG AAAACACCAG ATTGGTATTA GGGATGTTGC AATTGATAGA
TACGTTGTAA CAATCACCGC AGAACCTTCA AAAGTTAGCG AATTAAAAGG ATTGAAAGTT
CCAGAATGTG AAGTTGAATT AGAAGGCGAA AAAATTAATA TTGTCTTTGA AAATTTAGGC
GATGGAGAAT TAAAAAGAAA TATAATTGAT AGAGCAATTA AATTCGTTAA AAACGAACTT
GATAAACAAG ATAAAGATTT AACGTTTGAA GTTTGTAAAA TTGCTCCAGG AACAATTGTT
TCAGACTACA AAGCAAAAAG AGAAATTACA TTTGATACAG ACCCAACAGA ATTAGCAGAA
CCATACGGAT GGGTAAAAAG ATTCCCTGGA AGAGGTCAGT GGTTTTACAC TGCGCCAATG
GCAAAATTAT TCAGGGCCTT TGAAAGCTTG ATTATCGAAG AATGTATCGA TAAAATTGGT
TTTGATGAGT GTCTATTCCC AAAATTAATT CCACTGGACG TAATGTACAA AATGAGATAC
TTAGAAGGAC TTCCTGAAGG AATGTACTAT GTATGCCCTC CAAAAAGGGA ACCTGAAATG
TTCCAAGACT TTGTAAACGA AATGATGATT AAAAAAGAAA TTCCTATCGA AAAACTAAAA
ACTTTGTTAA GAGATCCTGC ATATGTTTTA GCACCTGCAC AATGTGAACC ATTCTACACG
TTCTTTGATC ATGAATTGGT TGACGTTGAT CACCCTTCGA AATTTTTCGA TAAAAGTGGT
TGGACTTACA GGTGGGAAGG CGGTGGAGCC AAAGGTCTTG ACAGAGTAAA CGAATTCTTA
AGGGGCGAAT GTGTATGGAT GGGTACTCCT GAATTTGTAG AAACAGTGCG AGACGATACC
CTAAAATACG CTGAAAATCT AGCGGAAAAA TTAGATTTAG AGTACTGGAC CGAAGTTGGT
GACGATCCAT TCTATTTAGA AGGTAGAAAA ACGGAAGCTA GAGGAATTGA ATTCCCAGAC
GTTCCAAAAT ATGAAATGAG ACTTTGGTTA CCCCACATTA AAGAAGAAAG AAAAGGTGTT
GCAGTAACTT CAGCAAATAT TCATGGAACA CACTTTGTAG AAGGATTTGG AATTAAAGAT
TACAAAGAAA GAAAAGTTTG GACTGGATGT ACGGGCTACG GATTAACAAG ATGGGTAATT
GGATTTTTAG CACAGTATGG CTACAATTAC GACGATTGGC CAGAATTAAT CCAGAAAAAA
GTTGGAAAAT TGCCAGAAAT TCCTAAATTA ATAACTTGGC CATAA
 
Protein sequence
MRFKLDGRII FSKDVEEETQ KDIVEVLENG DIFLKGVPEG KENEASKIET YEFDGKDLKL 
KMTSGTYTRA HEGIVRLKKP IMEKVGRKHQ IGIRDVAIDR YVVTITAEPS KVSELKGLKV
PECEVELEGE KINIVFENLG DGELKRNIID RAIKFVKNEL DKQDKDLTFE VCKIAPGTIV
SDYKAKREIT FDTDPTELAE PYGWVKRFPG RGQWFYTAPM AKLFRAFESL IIEECIDKIG
FDECLFPKLI PLDVMYKMRY LEGLPEGMYY VCPPKREPEM FQDFVNEMMI KKEIPIEKLK
TLLRDPAYVL APAQCEPFYT FFDHELVDVD HPSKFFDKSG WTYRWEGGGA KGLDRVNEFL
RGECVWMGTP EFVETVRDDT LKYAENLAEK LDLEYWTEVG DDPFYLEGRK TEARGIEFPD
VPKYEMRLWL PHIKEERKGV AVTSANIHGT HFVEGFGIKD YKERKVWTGC TGYGLTRWVI
GFLAQYGYNY DDWPELIQKK VGKLPEIPKL ITWP