Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1738 |
Symbol | dapF |
ID | 5737479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1634969 |
End bp | 1635802 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641284239 |
Product | diaminopimelate epimerase |
Protein accession | YP_001549782 |
Protein GI | 159906120 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA CAAAAATGCA CGGTCTAGGC AACGATTATA TCTACGTAGA TGCAATTTCG CAAAAAATTG AAAACCCAAA CGAAATTTCG AGATTCGTAA GCGACAGACA TTTTGGAATA GGTTCAGATG GTCTTGTATT GATCCTCCCC TCAGATTTAG CTGACTTTAA AATGAGAATG TTTAATTCAG ATGGTTCCGA AGCTGAAATG TGTGGTAATG CAATTCGTTG CGTTGGAAAG TTCGTTTATG ATAAAAAAAT GACTGATAAA TCAACAATTA CTATTGAAAC ACTTGCAGGA ATAAAAGTTC TTGAAATGAC AATCGAAAAT GACAAAGTAG TTTTGGTAAA AGTTGATATG GGCGAACCAA TCTTAAAAGC AGAAACAATT CCTGTTTTAA GTGAAAAACA TCCTGTAATC GATGAAGAAA TTACTGCAAA AGATTACTGC TATAATTTCA CCTGTGTTTC AATAGGGAAC CCGCATGCAA TAACATATAT TGAAAATGTG GAAGAATTTC CGCTTGAAAA AATCGGTCCA TTATTTGAAA TCCACGAAAA ATTCCCAAGA AAAACAAATG TTGAATTCGT TGAATTAATC GATGATTCTA CAGTTAAAAT GAGAGTTTGG GAAAGAGGTG CTGGTGAAAC ACTTGCATGC GGAACAGGCG CTTGTGCAGT CTTAGTTGCA TCAGTTTTAA AAGGTTACGT TGGTAGAAAA GCAACAGTCA AACTTCTCGG TGGAGATTTA ACAATCGAAT GGAATGAGAG TGACAATCAC ATCTACATGA CTGGTCCTGC AACAACAGTC TTTGAAGGAG AAATTGACAT TTAA
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Protein sequence | MKFTKMHGLG NDYIYVDAIS QKIENPNEIS RFVSDRHFGI GSDGLVLILP SDLADFKMRM FNSDGSEAEM CGNAIRCVGK FVYDKKMTDK STITIETLAG IKVLEMTIEN DKVVLVKVDM GEPILKAETI PVLSEKHPVI DEEITAKDYC YNFTCVSIGN PHAITYIENV EEFPLEKIGP LFEIHEKFPR KTNVEFVELI DDSTVKMRVW ERGAGETLAC GTGACAVLVA SVLKGYVGRK ATVKLLGGDL TIEWNESDNH IYMTGPATTV FEGEIDI
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