Gene MmarC6_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1730 
Symbol 
ID5737343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1628120 
End bp1628560 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content34% 
IMG OID641284231 
ProductCheW protein 
Protein accessionYP_001549774 
Protein GI159906112 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.996579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACG TTCCAAAAGT AGTAGTTTTC AAATTGGCAA GCAATGAATA TTGTTTGAGA 
GTAACGGGTG TAAGAGAAGT TTTAAAATTA CAAGATATTA CTTCCATTCC AAATACTCCA
AGCTATATCG TCGGAGTTAC AAACATTCGT GGCGAAATCA TGCCAATCAT CGATCTTAGA
AAGAAATTAA ATCTTTTTGA TGATGCGGGA GATGAAGATG ATGAAAAACT TGTAATGGTT
GTAGAAATCG ATGGTGTTCC GATTGGAATT TTAGTTGATT CTGTAAGCGA TGTAATGCAG
ATCTCATCTG AACAGATCGA AGACATTGAA GGAATCAAGA AAAATGCAAG CGGAGAATAT
ATCGAAGGCA TTGCAAAAAT TGGAAATAGA TTGATCATTA TTCTTGACAT TAAAAATTTA
ATTGACCCTC AAGAATTCTA A
 
Protein sequence
MDDVPKVVVF KLASNEYCLR VTGVREVLKL QDITSIPNTP SYIVGVTNIR GEIMPIIDLR 
KKLNLFDDAG DEDDEKLVMV VEIDGVPIGI LVDSVSDVMQ ISSEQIEDIE GIKKNASGEY
IEGIAKIGNR LIIILDIKNL IDPQEF