Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1719 |
Symbol | aroE |
ID | 5737461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1616998 |
End bp | 1617837 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 641284220 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001549763 |
Protein GI | 159906101 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.049913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATT CCAAAACAAA ACTAATCGGA CTTATTGGAC ATCCTGTAGA ACATTCATTT TCACCGATAA TGCATAACGC CGCAATTAAA GATCTTGGAA TAAACTATAC ATACCTTGCA TTTGATGTTT CAGAAGAAAA TCTAAAATAT ATTGTATCGG GTGCAAAAGC ACTCCAAATT GCAGGTTTTA ACGTTACAAT ACCTCATAAA ATAAACATTA TGAAATATTT GGACGAAATT GATGAAGATG CAAAATCAAT TGGTGCAGTA AATACTGTAA AAATTGAAAA TGGAAAAACA ATTGGATATA ACACTGACGG AATTGGTGTA AAGAGAGCAC TTGAAGAAAA AAGTGGAATT TTAATTAATA AAAACATTTT AATTATAGGT TCAGGAGGTG CTTCAAGAGC TGTTTCTTTT GAACTTGCAA AAGAAAATAA TTTAACAATT GTAAACAGAA ATATTGAAAA AGCGAAAATT CTTTCTGAAG AACTTTCTAC AAAATTAAAA AAAGAAAATT CGATAAAATA CGGAGCATTG AATATAGATA TAAAAAATTT TGATATAATT ATAAATACAA CGCCGGTTGG AATGTATCCC GACACAGATG TAAATCCAGT AATTCCGTTG AATGATATAA AAAAAAGTGC TGTTGTGATG GATTTAATAT ACAATCCCCT TGAACCTGTG TTTTTAAAAG AAGCTATGAA ATATGGTGTA GAAACTATAA ATGGTCTTGG AATGCTTGTA TATCAGGGAG CTGTTTCCTT TCAGATATGG ACTGGAAAAA AACCAGATGT ATATGTGATG AAAAAAGCTA TTAACTCAAA AATTAGATAG
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Protein sequence | MIDSKTKLIG LIGHPVEHSF SPIMHNAAIK DLGINYTYLA FDVSEENLKY IVSGAKALQI AGFNVTIPHK INIMKYLDEI DEDAKSIGAV NTVKIENGKT IGYNTDGIGV KRALEEKSGI LINKNILIIG SGGASRAVSF ELAKENNLTI VNRNIEKAKI LSEELSTKLK KENSIKYGAL NIDIKNFDII INTTPVGMYP DTDVNPVIPL NDIKKSAVVM DLIYNPLEPV FLKEAMKYGV ETINGLGMLV YQGAVSFQIW TGKKPDVYVM KKAINSKIR
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