| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1716 |
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| Symbol | |
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| ID | 5737472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | + |
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| Start bp | 1614733 |
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| End bp | 1615410 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641284217 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001549760 |
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| Protein GI | 159906098 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02253] HAD superfamily (subfamily IA) hydrolase, TIGR02253 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.204588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGAG GGGTGCTTTT TGACCTTGAC GATACACTGT ACAATTCTTC AACTTTTGCA
AGCCGTGCAC GAAAAGAAGC ATTGAGGTCG ATGATCGATG CAGGCTTGGA CGCTACCGAA
GAAGATGCTT TAAAAATATT GAATAAAATT ATTGAGCAGA AGGGTTCAAA CTACGGGGGC
CACTTTAACG ACCTTGTAAA GGCAGTTACT GGCAGTTACG ACCCAAAAAT AATTACAACG
GGTATTATCA CCTACCATAA TGTTAAATTT GCGCTACTCA GGCCATATTC TGACACAATA
AAAACATTAA TGGATTTAAG GAGTATAGGT TTAAGTTTGG GGATTTTAAC AGATGGAATT
ACCATAAAAC AGTGGGAAAA ACTAATAAGG CTTGGAATCC ATCCATTTTT TGATGAAGTC
ATAACTTCAG AAGAATATGG CCTAGGAAAA CCAAATATCG AATTTTTTAA CTACGGACTT
AAAAAAATTA ATTTAAAAGC TGAAGAAGTC GTTTATGTTG GGGACAGGGC TGATAAAGAT
ATGGTTCCGG CTAAATCTGT TGGAATGACT ACTGTTAGAA TATTACAGGG AAAATATTCA
GAAATTAGCG ATGATGTAAG CGATTACGCG ATAAAAAATA TTTCAGAACT TTCGAAAATA
ATTAAACCAC TTATTTAA
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| Protein sequence | MIRGVLFDLD DTLYNSSTFA SRARKEALRS MIDAGLDATE EDALKILNKI IEQKGSNYGG
HFNDLVKAVT GSYDPKIITT GIITYHNVKF ALLRPYSDTI KTLMDLRSIG LSLGILTDGI
TIKQWEKLIR LGIHPFFDEV ITSEEYGLGK PNIEFFNYGL KKINLKAEEV VYVGDRADKD
MVPAKSVGMT TVRILQGKYS EISDDVSDYA IKNISELSKI IKPLI
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