| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1699 |
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| Symbol | |
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| ID | 5737644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1595632 |
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| End bp | 1598076 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641284200 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001549743 |
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| Protein GI | 159906081 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGAC TAATTATCTG TGAGAAACCA AACGTTGCTA AAAAAATTGC AGAAGCTCTT
GGAAAACCAA AGAAAAAATC CCATAATTCT GTGCCATATT ATGAAGTGGA ACGAAGTGGG
GAAAACGTAA TTGTAGCGTC AGCAGTAGGT CACCTTTACA CGCTGCAAGA AAAAAATAAA
GCTAAATTTG GAGATTACCC TGTTTACGAT ATAGATTGGG TTCCAGCGTC AACCCTCGAT
GAAAAAAAAT ATATTCAAAA ATACATCGAT GCACTGAAAA AAGTTTCAAA AGAAGCTAAC
AAATTTTACG TTGCAACGGA CTGGGATATC GAAGGAGAAT TAATTGGATA TCACGCATTA
AATTTCTCAT GTGGTCAGAA AAACGCTCAC AGATTAAGAT TTTCAAGTTT AACGAAGAAA
GAAATTGTAA AAGCTTATGA AACACCAAAT GAAATTGATT TTGGACTTGT TGATGCAGGG
GACAGCAGAC ACAAAATTGA CTGGTATTTT GGTATAAATG TTTCAAGAGC GCTTATGCAG
GCAGTTAGCT CTGTTAAACG ATGGAAAACT CTGAGTACAG GTAGAGTTCA GGGCCCAGCA
CTTGCTTTTT TAGTAGATAA AGAAATGGAA ATTAAAAACT TCGTTCCAAC ACCTTACTGG
GTGCTCGAAG CTCTTTTAGA TAATGAATTA ATTGCAATTC ACGAGCTTGA AAAATTCTGG
GATGAAGATG AAGCAAATAA AGCTTTTGAA AAAGTAAAAG ATCAAAAGCA GGCAACCGTT
TCAGATGTTA AAAAAACAAT GAAAAGCATC CCTCCAAATG TGCCTTTCGA TTTAGGTACG
CTTCAAAGGG AAGCACACAA TATGTTTAGA TTTTCACCTA AAAAAACGCA AGAAATTGCT
CAAAAATTAT ATGAAAAAGG ATACTGTTCA TATCCAAGAA CGAGTTCCCA AAAACTTCCC
GATGATAAAG CGTACATGGA AGAAATCCTA AAAAATCTTT CAAAAAATAA AAATTACAGG
CCATATATTG AAACAATTTT AAATGAAAAC AGAAAACCAA TTTCTGGTAA AAAGGACGAC
CCTGCACACC CTGCAGTACA CGCAGTAGAC GTTCCAAAAG AACATCTTCC TGACGATGAG
TTAAAATTGT ATGAACTCAT TGCAAGAAGG ACTATCGCAC TTTACTGGGA TAATGCTGAA
AGGGAATATT CGAAAATCAA TCTCGATATA AACGGCGAAA TATTCAAATT AAGCGGTTCG
AGAACTGTTA AAGAAGGATG GCATGAAATA TATTACTACA CGAAATTCGA TGAAATAGAA
CTTCCAGAAT TAAAAGAAAC AGACATTGTA AAAGTAAATA ACATTAATTT TGAAGCAAAA
GAAACGAAGC CTCCAAAAAG ATACACAATG GCTTCAATTA TCAAGGAACT CGAAAAAAGA
AAACTCGGAA CAAAGGCAAC AAGAGCAGAT ATTCTTGAAA AGCTGACCAA AAGAGGTTAT
GTAATTGAAG ATGGTTCGTT AACCGTTACG GACCTTGGAA TTGGAGTTAC TGAAACTTTA
AGAAAATACT GTCCTGAGAT CGTTGAAGAA ACACTTACGA GAGATCTTGA AGATAAATTA
GAACTCATCC AGGATAAAAA AATCAAAAAA GAAGACGTTA TAAAGGAAAC TGAAAATAAA
CTTACAAAGA TTCTCGGAGA GTTCCGTTTA AAAGAAAAAG AAATCGGAAA TGAACTTGTT
GATAAACTTG ATTCAACAAA CCGGTCTTTA CAGATAATTG GAAAATGTAA ATGCGGCGGA
GACCTAATCA TCATCCGTAC AAAGGGTAAA AAAAGATTTG TTGGATGCAG TAACTATCCA
GACTGTGATA TTACATTCCC GCTACCCCAG AAAGGAAGAA TCAAAGTTTT AAATGAAGTT
TGTGAAACAT GCCATAATCC AGTAATTGGA TTAGATAGAG TAAAAATCTG TGTAAATCAG
GATTGTAACA CAAGAATTTC AGAAGAAGAT AAAAAAGAAA TTGAAAAAGC CGAAAAAGAA
GAAAAAATAT GTCCAAAATG CGGTGGCAAG CTTTTAATTA AAAAAGGCCC TTACGGGGTT
TTCCGTGGCT GTGAAAATTA CCCTAAATGT AAATATACTG AAAAATTAAA CGGAGAATCC
AATGAAAAGG AAATCGTTGG AAAATGCCCA AAATGTGGAA GCGACTTATT TAAAAGAAGG
GGCAGATTCG GGGAATTTAT TGGATGCAGC AATTATCCAA AATGCAGACA CACTGAAAAA
ATAGAAAAGA AAAAAGACTA TAATTCAAAA GAAACTAAAG CGGAAAAAAA GGAAACAACA
AAACCAAAAA CCGCTAAAAA AACAACTACA AAAAAGACAG AAACCAAAAA AACCACTAAA
TCCGCTGCTA AAAAAACAAC TACAAAGAAA ACTGCGAAAA AATGA
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| Protein sequence | MTGLIICEKP NVAKKIAEAL GKPKKKSHNS VPYYEVERSG ENVIVASAVG HLYTLQEKNK
AKFGDYPVYD IDWVPASTLD EKKYIQKYID ALKKVSKEAN KFYVATDWDI EGELIGYHAL
NFSCGQKNAH RLRFSSLTKK EIVKAYETPN EIDFGLVDAG DSRHKIDWYF GINVSRALMQ
AVSSVKRWKT LSTGRVQGPA LAFLVDKEME IKNFVPTPYW VLEALLDNEL IAIHELEKFW
DEDEANKAFE KVKDQKQATV SDVKKTMKSI PPNVPFDLGT LQREAHNMFR FSPKKTQEIA
QKLYEKGYCS YPRTSSQKLP DDKAYMEEIL KNLSKNKNYR PYIETILNEN RKPISGKKDD
PAHPAVHAVD VPKEHLPDDE LKLYELIARR TIALYWDNAE REYSKINLDI NGEIFKLSGS
RTVKEGWHEI YYYTKFDEIE LPELKETDIV KVNNINFEAK ETKPPKRYTM ASIIKELEKR
KLGTKATRAD ILEKLTKRGY VIEDGSLTVT DLGIGVTETL RKYCPEIVEE TLTRDLEDKL
ELIQDKKIKK EDVIKETENK LTKILGEFRL KEKEIGNELV DKLDSTNRSL QIIGKCKCGG
DLIIIRTKGK KRFVGCSNYP DCDITFPLPQ KGRIKVLNEV CETCHNPVIG LDRVKICVNQ
DCNTRISEED KKEIEKAEKE EKICPKCGGK LLIKKGPYGV FRGCENYPKC KYTEKLNGES
NEKEIVGKCP KCGSDLFKRR GRFGEFIGCS NYPKCRHTEK IEKKKDYNSK ETKAEKKETT
KPKTAKKTTT KKTETKKTTK SAAKKTTTKK TAKK
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