| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1685 |
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| Symbol | |
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| ID | 5737379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1583851 |
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| End bp | 1585572 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641284186 |
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| Product | DNA ligase I, ATP-dependent Dnl1 |
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| Protein accession | YP_001549729 |
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| Protein GI | 159906067 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTTA TTGATTTTTG TAAAATTCTT GATAAAATTG AAAAAACTAC GAAAAGGCTT
GAAAAAACAG ACTATTTTGT TGAATTAATC GATTTTATTA AAAATAATGG AAAAGCTGAA
AATTTAAAAC AAGTGTCTCA AATCACGATT GGAAGAGTTT TTGCAGAATT TGAAAATAAA
GAAATTGGGA TTGGACCAAA TTTATTGATT GAGGCAGTAA AAACAACTGG AATTTCTGAA
AAAGATTTAA AAGCAGAAAT CAAAAAAACA GGGGACATTG GAATTGCTGT TGAAAATTTA
AGTTCAAATA TAAAACAGGT GTCACTATTC AGCCAGCCCC TCACACTCGA AGAGATATAC
TCCACATTAA AAAAACTCTC AGAAATTGAA GGAAACTCAT CCCAAAAAAA GAAAACTAGA
ATAATTTCAA ATTTACTAAT TTTATCAAAT CCTGTTGAAT CAAGATACAT TTCAAGACTT
ATTTTAGAGG ATATGAGAAT TGGAATGAAT ATTCCAACAA TTTTGGCCTC GTTTTCAAAT
TATTTTAATG TTAATAAGGA AGCTGTTGAA AAGATATATG CTGTAACAAA CGATATCGGA
CTTATCGGTA AAAAGTTGAT TTCTGGATCA GACATTGAAA ACGATTCAGA ATTAAAATTA
AAAGTATTTC GACCAATAAA ACCGATGCTT GCACAGTTAA CCCCCTCAAT TGAAGATGCG
ATAATCGAAA CTAAAATGCC GCAATTTGAA ACAAAATACG ACGGTGCAAG GGTTCAGGTG
CATAAATCGA ATGGAAAGGT AAATATATAC AGCAGAAGAC TTGAAAACAT TACAAATTCA
GTTCCAGAAC TCGTTGAAGA GATTAACAAA ATAGATATTG ATAATATCAT TTTAGAAGGA
GAATGCGTTG CAATGGACCT ATCTTCTGGA AAGCCAAGGC CGTTCCAGGA CATTTTAAGA
AGGTTCAGGC GAAAGTACGA TATAGACAAA GTGGCGGAAA AAATAGCTTT GAGAATATAC
TTTTTCGATG TTTTATATTA TGAAAAAGGT TTAATCGATA CTCCGTTAAA AAATAGAAGA
GAAATTTTGG AAAAATTATT TGGAACAAAT AATTGGGATA GTGAACTAGA AAAGATTCAA
AAAGAGATTT TTTCGAACAA AATGCTCTTT TCGTCATTTA AATTAAATAG CGATGATCCA
GATCTTGCAA AAGAATTTTT TAACTGGAGT TTAAGTATCG GGCATGAGGG AATCATGATT
AAAAACCCTG ATGCCCCATA CACACCAGGA AGTCGTGTTA AAACAATGTA TAAAGTTAAA
CCAACTTTGG AAAATCTTGA TGTGGTTGTA ACTCGTGCAA AAATTGGAAT GGGAAAAAGA
AAAGACTGGT ACGGCTCATA TGAAATTTCT GTAAAAGATG ATGAAGATAA TCTGCACGTC
ATTGGAAACG TTGGAAGTGG ACTTACTGAA GACGACCTTG AAAGACTTAC AACAATTGTT
AATGAAATAA AAATTGAAGA TTTAGGCGAA GAAGTAATTT TAGAACCCAA AATAGTACTT
GAAGTAACAT ATGAAGAAAT TCAAACCTCT GAAAAATACG AAATGGGTTA TGCTCTTCGT
TTTCCAAGAG TTGTTCAAAT AAGGGAAGAC AAATCTATAA ATGACATTAA TACATTAGAT
GATGTGAAGA AAATATACGA AATAGAACGA AACAGAAAAT AA
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| Protein sequence | MLFIDFCKIL DKIEKTTKRL EKTDYFVELI DFIKNNGKAE NLKQVSQITI GRVFAEFENK
EIGIGPNLLI EAVKTTGISE KDLKAEIKKT GDIGIAVENL SSNIKQVSLF SQPLTLEEIY
STLKKLSEIE GNSSQKKKTR IISNLLILSN PVESRYISRL ILEDMRIGMN IPTILASFSN
YFNVNKEAVE KIYAVTNDIG LIGKKLISGS DIENDSELKL KVFRPIKPML AQLTPSIEDA
IIETKMPQFE TKYDGARVQV HKSNGKVNIY SRRLENITNS VPELVEEINK IDIDNIILEG
ECVAMDLSSG KPRPFQDILR RFRRKYDIDK VAEKIALRIY FFDVLYYEKG LIDTPLKNRR
EILEKLFGTN NWDSELEKIQ KEIFSNKMLF SSFKLNSDDP DLAKEFFNWS LSIGHEGIMI
KNPDAPYTPG SRVKTMYKVK PTLENLDVVV TRAKIGMGKR KDWYGSYEIS VKDDEDNLHV
IGNVGSGLTE DDLERLTTIV NEIKIEDLGE EVILEPKIVL EVTYEEIQTS EKYEMGYALR
FPRVVQIRED KSINDINTLD DVKKIYEIER NRK
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