Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1669 |
Symbol | |
ID | 5737345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1566720 |
End bp | 1567484 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641284170 |
Product | hypothetical protein |
Protein accession | YP_001549713 |
Protein GI | 159906051 |
COG category | [S] Function unknown |
COG ID | [COG1650] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.987983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATTACT TATTTATTTC TTCAAAAACC GACCCTGCAA GTCAGAACAT TAAAAAACAT GTTCAAAACT ACGGCTACAA CGTATTTGAA TTTGAAAAAA AATCAACTCA AACATATTCT TCGGAGTTTC CAACTTCAGA AATGTACATA TTTTTATCAA AACATGCAAG CGAAAGCAAA AAACCAACGC TTACGGTACA CACTCCCGGA AATTTAACCG AAGATAATTC ACACGGCGGA AATCCGGAAG AAATTTCTCC ATGTAGCCCC ATATTCAATA CATTGATGCT TCAAAATATG AATAAATACA ATGAAATGGA AGAATATAAA GAATTAGGGT TTGAAGTAAG TTTTGAAGTT TTACACCACG GCCCTACGGA TTTAAAAGCT CCTTCTGCGT TTGTAGAAAT TGGAAGTAGT GAAAAACAGT GGCAAATCGA TGATGCAGCA GAAATTATTA CAAATTCACT GATTGATACA CTAAACTCAA TTCAAAATTC TGAATACGAA GAAAAAGAAA AAATAATTGG AATCGGTGGG GGACACTATT CTCCAAAATT TACAAAACTT GCATTAAGAG AAGAATATTA TGTTGGATAT TTGACCCCAA AACACGCAAA ACTCTCCGAA AATATTTTAA AACAGCTGAT TTCAAAACAA AACTTTGATT TTGTAGGGAT CGACTGGAAG GGATTGTATG GCGAAGATAA AAGAAAATAC GTAGAATTTT TCGATGAAAA TGATATTTCA TGGCAGAGAT TTTAA
|
Protein sequence | MDYLFISSKT DPASQNIKKH VQNYGYNVFE FEKKSTQTYS SEFPTSEMYI FLSKHASESK KPTLTVHTPG NLTEDNSHGG NPEEISPCSP IFNTLMLQNM NKYNEMEEYK ELGFEVSFEV LHHGPTDLKA PSAFVEIGSS EKQWQIDDAA EIITNSLIDT LNSIQNSEYE EKEKIIGIGG GHYSPKFTKL ALREEYYVGY LTPKHAKLSE NILKQLISKQ NFDFVGIDWK GLYGEDKRKY VEFFDENDIS WQRF
|
| |